RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 ZNF19P17023 458 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 SSX1Q16384 188 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 SLC25A47Q6Q0C1 308 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 SLC26A10Q8NG04 563 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 TMEM54Q969K7 222 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 PRDM14Q9GZV8 571 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 FOXD3Q9UJU5 478 aaPredicted RBP22.02■■□□□ 1.12
RFFL-206ENST00000447669 SPARCP09486 303 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 GAAP10253 952 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 CD36P16671 472 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 PRR30Q53SZ7 412 aaPredicted RBP22.02■■□□□ 1.12
RFFL-206ENST00000447669 CDC20BQ86Y33 519 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 LINC00346Q8IVM7 164 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 RPL3LQ92901 407 aaKnown RBP22.02■■□□□ 1.12
RFFL-206ENST00000447669 MARCH7Q9H992 704 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 ITPR1Q14643 2758 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 DOCK7Q96N67 2140 aa22.02■■□□□ 1.12
RFFL-206ENST00000447669 WNT11O96014 354 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 LSM3P62310 102 aaKnown RBP22.01■■□□□ 1.11
RFFL-206ENST00000447669 LIPKQ5VXJ0 399 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 CORO6Q6QEF8 472 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 RPTNQ6XPR3 784 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 SPATC1Q76KD6 591 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 LINGO2Q7L985 606 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 HDDC2Q7Z4H3 204 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 THEM6Q8WUY1 208 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 PNPLA2Q96AD5 504 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 ISOC1Q96CN7 298 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 TRIB1Q96RU8 372 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 EMC7Q9NPA0 242 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 PAQR5Q9NXK6 330 aaPredicted RBP22.01■■□□□ 1.11
RFFL-206ENST00000447669 GRIP1Q9Y3R0 1128 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 SLC22A20A6NK97 555 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 RGS6P49758 472 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 HSF2Q03933 536 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 DNM1P34Q6PK57 102 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 SLC16A12Q6ZSM3 486 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 GLB1L2Q8IW92 636 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 C20orf196Q8IYI0 205 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 C11orf40Q8WZ69 217 aa22.01■■□□□ 1.11
RFFL-206ENST00000447669 DGCR14Q96DF8 476 aaKnown RBP22.01■■□□□ 1.11
RFFL-206ENST00000447669 ALKBH3Q96Q83 286 aaPredicted RBP22.01■■□□□ 1.11
RFFL-206ENST00000447669 NOSIPQ9Y314 301 aaKnown RBP22.01■■□□□ 1.11
RFFL-206ENST00000447669 CAB39Q9Y376 341 aaPredicted RBP22.01■■□□□ 1.11
RFFL-206ENST00000447669 SIRT4Q9Y6E7 314 aaPredicted RBP22.01■■□□□ 1.11
RFFL-206ENST00000447669 NCOA6Q14686 2063 aaPredicted RBP22■■□□□ 1.11
RFFL-206ENST00000447669 AHCYL1O43865 530 aa22■■□□□ 1.11
RFFL-206ENST00000447669 TGFBR1P36897 503 aa22■■□□□ 1.11
RFFL-206ENST00000447669 ACTC1P68032 377 aa22■■□□□ 1.11
RFFL-206ENST00000447669 ACTA1P68133 377 aa22■■□□□ 1.11
RFFL-206ENST00000447669 SOWAHCQ53LP3 525 aaPredicted RBP22■■□□□ 1.11
RFFL-206ENST00000447669 RBM24Q9BX46 236 aaKnown RBP22■■□□□ 1.11
RFFL-206ENST00000447669 FAM192AQ9GZU8 254 aa22■■□□□ 1.11
RFFL-206ENST00000447669 KLHL9Q9P2J3 617 aa22■■□□□ 1.11
RFFL-206ENST00000447669 LAMP5Q9UJQ1 280 aa22■■□□□ 1.11
RFFL-206ENST00000447669 IGKV3D-15A0A087WSY6 115 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 FAM180AQ6UWF9 173 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 NUFIP2Q7Z417 695 aaKnown RBP21.99■■□□□ 1.11
RFFL-206ENST00000447669 OR52N1Q8NH53 320 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 SNX33Q8WV41 574 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 SARAFQ96BY9 339 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 UGT2A1Q9Y4X1 527 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 CRYABP02511 175 aaKnown RBP21.99■■□□□ 1.11
RFFL-206ENST00000447669 ALOX5APP20292 161 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 LAP3P28838 519 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 ZNF585AQ6P3V2 769 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 C19orf48Q6RUI8 117 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 GPR137Q96N19 417 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 ULBP2Q9BZM5 246 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 INPP5EQ9NRR6 644 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 RSL24D1Q9UHA3 163 aaKnown RBP21.99■■□□□ 1.11
RFFL-206ENST00000447669 GNG8Q9UK08 70 aa21.99■■□□□ 1.11
RFFL-206ENST00000447669 ZGRF1Q86YA3 2104 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 GADD45AP24522 165 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 PSMB10P40306 273 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 TMPRSS11AQ6ZMR5 421 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 GCNT2Q8N0V5 402 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 OTOSQ8NHW6 89 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 TMEM203Q969S6 136 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 C12orf43Q96C57 262 aaKnown RBP21.98■■□□□ 1.11
RFFL-206ENST00000447669 OR51E2Q9H255 320 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 CRLF2Q9HC73 371 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 ACOXLQ9NUZ1 547 aa21.98■■□□□ 1.11
RFFL-206ENST00000447669 RP1L1Q8IWN7 2480 aaPredicted RBP21.98■■□□□ 1.11
RFFL-206ENST00000447669 ZNF670-ZNF695F2Z2N8 137 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 SLC43A1O75387 559 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 MRPL33O75394 65 aaKnown RBP21.97■■□□□ 1.11
RFFL-206ENST00000447669 OR8G3PP0DMU2 310 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 TTKP33981 857 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 ENTPD1P49961 510 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 TSPO2Q5TGU0 170 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 ATCAYQ86WG3 371 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 MCEMP1Q8IX19 187 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 RNF167Q9H6Y7 350 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 NDUFA13Q9P0J0 144 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 RCE1Q9Y256 329 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 ZNF823P16415 610 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 MLLT11Q13015 90 aaPredicted RBP21.97■■□□□ 1.11
RFFL-206ENST00000447669 CNPY1Q3B7I2 92 aa21.97■■□□□ 1.11
RFFL-206ENST00000447669 ZNF324BQ6AW86 544 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms