RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ACER2Q5QJU3 275 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 MISPQ8IVT2 679 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 OR4N2Q8NGD1 307 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 ZNF285Q96NJ3 590 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 TMED7Q9Y3B3 224 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 TMEM235A6NFC5 223 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 C1orf196B1AJZ1 125 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 PRNPP04156 253 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 SFTA3P0C7M3 94 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 TPT1P13693 172 aaKnown RBP12.64□□□□□ -0.39
VPS52-212ENST00000445902 DPTQ07507 201 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 MOGAT2Q3SYC2 334 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 DPY19L4Q7Z388 723 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 BAP18Q8IXM2 172 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 C10orf53Q8N6V4 93 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 OR4K17Q8NGC6 315 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 OR2G2Q8NGZ5 317 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 ZNF417Q8TAU3 575 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 RNF141Q8WVD5 230 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 ASB13Q8WXK3 278 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 SMARCD2Q92925 531 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 RHOFQ9HBH0 211 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 CGGBP1Q9UFW8 167 aaPredicted RBP12.64□□□□□ -0.39
VPS52-212ENST00000445902 IGLON5A6NGN9 336 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 C5orf52A6NGY3 159 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 OR4C45A6NMZ5 311 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 CT62P0C5K7 136 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 CD79AP11912 226 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 CPT2P23786 658 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 ACAA2P42765 397 aaKnown RBP12.64□□□□□ -0.39
VPS52-212ENST00000445902 PGDP52209 483 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 IL13RA1P78552 427 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 RUNX2Q13950 521 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 NNATQ16517 81 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 SLC22A6Q4U2R8 563 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 PRSS35Q8N3Z0 413 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 BHLHE23Q8NDY6 225 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 ISOC2Q96AB3 205 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 FOXRED1Q96CU9 486 aaPredicted RBP12.64□□□□□ -0.39
VPS52-212ENST00000445902 RRNAD1Q96FB5 475 aaKnown RBP12.64□□□□□ -0.39
VPS52-212ENST00000445902 SLC25A21Q9BQT8 299 aaPredicted RBP12.64□□□□□ -0.39
VPS52-212ENST00000445902 COMMD4Q9H0A8 199 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 WDR76Q9H967 626 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 RCC2Q9P258 522 aaKnown RBP12.64□□□□□ -0.39
VPS52-212ENST00000445902 LAMP5Q9UJQ1 280 aa12.64□□□□□ -0.39
VPS52-212ENST00000445902 F13BP05160 661 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ZNF735P0CB33 412 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 GPR143P51810 404 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 CXADRP78310 365 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 MST1LQ2TV78 715 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 VN1R4Q7Z5H5 301 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 AMELYQ99218 206 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 MMP26Q9NRE1 261 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 DPP7Q9UHL4 492 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 KLK13Q9UKR3 277 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 EFCAB7A8K855 629 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 YKT6O15498 198 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 S100A8P05109 93 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ID4P47928 161 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 PJVKQ0ZLH3 352 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 CDNFQ49AH0 187 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 C9orf152Q5JTZ5 239 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 OR52W1Q6IF63 320 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 JAZF1Q86VZ6 243 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ETFBKMTQ8IXQ9 262 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ADAD2Q8NCV1 583 aaKnown RBP12.63□□□□□ -0.39
VPS52-212ENST00000445902 GPR148Q8TDV2 347 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 COX14Q96I36 57 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ZNF558Q96NG5 402 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 MKKSQ9NPJ1 570 aaPredicted RBP12.63□□□□□ -0.39
VPS52-212ENST00000445902 DZANK1Q9NVP4 752 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 PRR13Q9NZ81 148 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 PCOLCE2Q9UKZ9 415 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 C19orf53Q9UNZ5 99 aaPredicted RBP12.63□□□□□ -0.39
VPS52-212ENST00000445902 SLC22A13Q9Y226 551 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 THSD7BQ9C0I4 1608 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 LOC100289279A0A1B0GTE1 492 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 BRINP1O60477 761 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 CD74P04233 296 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 NQO2P16083 231 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ADAM8P78325 824 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ZNF765Q7L2R6 523 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 PRSS41Q7RTY9 318 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 SKA3Q8IX90 412 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 SLC39A11Q8N1S5 342 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 CD99L2Q8TCZ2 262 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 EDAQ92838 391 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 RELTQ969Z4 430 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 ZNF426Q9BUY5 554 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 NMNAT2Q9BZQ4 307 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 LMAN2LQ9H0V9 348 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 CHMP1AQ9HD42 196 aaPredicted RBP12.63□□□□□ -0.39
VPS52-212ENST00000445902 MBNL1Q9NR56 388 aaKnown RBP12.63□□□□□ -0.39
VPS52-212ENST00000445902 PCDHGA1Q9Y5H4 931 aa12.63□□□□□ -0.39
VPS52-212ENST00000445902 A0A1W2PPC1 479 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 MSGN1A6NI15 193 aa12.62□□□□□ -0.39
VPS52-212ENST00000445902 PRRT4C9JH25 899 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms