RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 AURKCQ9UQB9 309 aa16.22■□□□□ 0.19
HDAC4-203ENST00000445704 PMF1-BGLAPU3KQ54 211 aa16.22■□□□□ 0.19
HDAC4-203ENST00000445704 ARFGEF3Q5TH69 2177 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 TEX13CA0A0J9YWL9 993 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 TMEM129A0AVI4 362 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 UNC119BA6NIH7 251 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 B9A039 149 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 RNF223E7ERA6 249 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 LY6HO94772 140 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 NR2C1P13056 603 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 NPR2P20594 1047 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 SNRPD2P62316 118 aaKnown RBP16.21■□□□□ 0.19
HDAC4-203ENST00000445704 TRIM25Q14258 630 aaKnown RBP16.21■□□□□ 0.19
HDAC4-203ENST00000445704 SGCAQ16586 387 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 SLC36A2Q495M3 483 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 THEM4Q5T1C6 240 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 TMEM53Q6P2H8 277 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 FOXL2NBQ6ZUU3 175 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 PAQR4Q8N4S7 273 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-203ENST00000445704 FNDC8Q8TC99 324 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 ZNF570Q96NI8 536 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 SORCS2Q96PQ0 1159 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 C1orf21Q9H246 121 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 MUC13Q9H3R2 512 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 PLK3Q9H4B4 646 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 KRCC1Q9NPI7 259 aaPredicted RBP16.21■□□□□ 0.19
HDAC4-203ENST00000445704 NRIP3Q9NQ35 241 aa16.21■□□□□ 0.19
HDAC4-203ENST00000445704 SLC22A23A1A5C7 686 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 IMPA2O14732 288 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 MGRN1O60291 552 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 UBOX5O94941 541 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 LY6G6DO95868 133 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 BMP4P12644 408 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 CCL2P13500 99 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 MAGEA2P43356 314 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 KRR1Q13601 381 aaKnown RBP16.2■□□□□ 0.18
HDAC4-203ENST00000445704 MTX3Q5HYI7 312 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 CLEC9AQ6UXN8 241 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 DPPA2Q7Z7J5 298 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 DHFR2Q86XF0 187 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 SVOPLQ8N434 492 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 ZNF525Q8N782 197 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 MAPK1IP1LQ8NDC0 245 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 SLC30A7Q8NEW0 376 aa16.2■□□□□ 0.18
HDAC4-203ENST00000445704 CCDC124Q96CT7 223 aaKnown RBP16.2■□□□□ 0.18
HDAC4-203ENST00000445704 IGHV4-30-2A0A087WSY4 118 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 A0A1W2PPL8 197 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 OR10H3O60404 316 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 SCG5P05408 212 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 IGFBP1P08833 259 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-203ENST00000445704 ZNF32P17041 273 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 SDHAP31040 664 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 EFNA4P52798 201 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 PABPC1L2AQ5JQF8 200 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 FAM27BQ5VT28 67 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 CPEB3Q8NE35 698 aaKnown RBP16.19■□□□□ 0.18
HDAC4-203ENST00000445704 ASB9Q96DX5 294 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 DOK1Q99704 481 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 THTPAQ9BU02 230 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 REG4Q9BYZ8 158 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 NDEL1Q9GZM8 345 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 IER3IP1Q9Y5U9 82 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 LYVE1Q9Y5Y7 322 aa16.19■□□□□ 0.18
HDAC4-203ENST00000445704 PRSS37A4D1T9 235 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 SOCS2O14508 198 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 ACOT8O14734 319 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 FPR3P25089 353 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 APEX1P27695 318 aaKnown RBP16.18■□□□□ 0.18
HDAC4-203ENST00000445704 LAP3P28838 519 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 GSSP48637 474 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 PPOXP50336 477 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 RIPPLY3P57055 190 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 ENDOGQ14249 297 aaKnown RBP16.18■□□□□ 0.18
HDAC4-203ENST00000445704 PGBD2Q6P3X8 592 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 SMARCD3Q6STE5 483 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 DPY19L2P2Q6ZN68 376 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 PTCHD4Q6ZW05 846 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 OR10H5Q8NGA6 315 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 OR4C15Q8NGM1 316 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 FANK1Q8TC84 345 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 MRPL24Q96A35 216 aaKnown RBP16.18■□□□□ 0.18
HDAC4-203ENST00000445704 VRK1Q99986 396 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-203ENST00000445704 MRPL37Q9BZE1 423 aaKnown RBP16.18■□□□□ 0.18
HDAC4-203ENST00000445704 OR52D1Q9H346 318 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 MAGIXQ9H6Y5 334 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 CCNB1IP1Q9NPC3 277 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 VNN3Q9NY84 501 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 SLC7A8Q9UHI5 535 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 TMCC3Q9ULS5 477 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 CMAHPQ9Y471 501 aa16.18■□□□□ 0.18
HDAC4-203ENST00000445704 XKRYO14609 159 aa16.17■□□□□ 0.18
HDAC4-203ENST00000445704 PPP1R3DO95685 299 aa16.17■□□□□ 0.18
HDAC4-203ENST00000445704 F12P00748 615 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-203ENST00000445704 HEXAP06865 529 aa16.17■□□□□ 0.18
HDAC4-203ENST00000445704 FAM157BP0CG42 384 aa16.17■□□□□ 0.18
HDAC4-203ENST00000445704 CTLA4P16410 223 aa16.17■□□□□ 0.18
HDAC4-203ENST00000445704 GLRXP35754 106 aa16.17■□□□□ 0.18
HDAC4-203ENST00000445704 HMGA2P52926 109 aa16.17■□□□□ 0.18
HDAC4-203ENST00000445704 PSG4Q00888 419 aa16.17■□□□□ 0.18
HDAC4-203ENST00000445704 GALK2Q01415 458 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms