RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 WFDC6Q9BQY6 131 aa12.42□□□□□ -0.42
UBE2F-216ENST00000445676 TMEM43Q9BTV4 400 aa12.42□□□□□ -0.42
UBE2F-216ENST00000445676 OR2J1Q9GZK6 312 aa12.42□□□□□ -0.42
UBE2F-216ENST00000445676 BEX1Q9HBH7 125 aa12.42□□□□□ -0.42
UBE2F-216ENST00000445676 TMEM106BQ9NUM4 274 aa12.42□□□□□ -0.42
UBE2F-216ENST00000445676 PNPOQ9NVS9 261 aa12.42□□□□□ -0.42
UBE2F-216ENST00000445676 SELENONQ9NZV5 590 aa12.42□□□□□ -0.42
UBE2F-216ENST00000445676 TIMM23O14925 209 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 MT-ATP6P00846 226 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 IL6P05231 212 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 CCNOP22674 350 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 CDH12P55289 794 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 HSF2Q03933 536 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 ZMYND11Q15326 602 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 RYR3Q15413 4870 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 RGNQ15493 299 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 NRN1LQ496H8 165 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 PABPC1L2AQ5JQF8 200 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 ZNF362Q5T0B9 420 aaPredicted RBP12.41□□□□□ -0.42
UBE2F-216ENST00000445676 ASPHD2Q6ICH7 369 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 LRRC28Q86X40 367 aaPredicted RBP12.41□□□□□ -0.42
UBE2F-216ENST00000445676 LRRC18Q8N456 261 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 ZNF283Q8N7M2 679 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 UPRTQ96BW1 309 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 POM121L2Q96KW2 1035 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 SIGLEC11Q96RL6 698 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 MSL2Q9HCI7 577 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 TAS2R5Q9NYW4 299 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 C1RLQ9NZP8 487 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 OR5V1Q9UGF6 321 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 KLHL21Q9UJP4 597 aa12.41□□□□□ -0.42
UBE2F-216ENST00000445676 LOC100509620A0A075B734 347 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 MGRN1O60291 552 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 NGFP01138 241 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 PPIAL4GP0DN37 164 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 STOMP27105 288 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 RGS8P57771 180 aaPredicted RBP12.4□□□□□ -0.42
UBE2F-216ENST00000445676 BTG1P62324 171 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 TNFAIP6P98066 277 aaPredicted RBP12.4□□□□□ -0.42
UBE2F-216ENST00000445676 DEFB112Q30KQ8 113 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 ESCO2Q56NI9 601 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 NFKBIDQ8NI38 313 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 UBE2FQ969M7 185 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 MCHR2Q969V1 340 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 ITCHQ96J02 903 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 ZNF347Q96SE7 839 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 ARHGDIGQ99819 225 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 PRDM13Q9H4Q3 707 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 WDR55Q9H6Y2 383 aaPredicted RBP12.4□□□□□ -0.42
UBE2F-216ENST00000445676 TMEM27Q9HBJ8 222 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 TNFRSF19Q9NS68 423 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 CYSLTR2Q9NS75 346 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 NOTCH3Q9UM47 2321 aa12.4□□□□□ -0.42
UBE2F-216ENST00000445676 CLPSL1A2RUU4 121 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 C5orf49A4QMS7 147 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 SRRM5B3KS81 715 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 C5orf58C9J3I9 102 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 BIRC5O15392 142 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 RNF13O43567 381 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 NDUFA7O95182 113 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 OR6A2O95222 327 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 TSPAN15O95858 294 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 HOXB9P17482 250 aaPredicted RBP12.39□□□□□ -0.43
UBE2F-216ENST00000445676 BGNP21810 368 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 EPHA3P29320 983 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 LIPAP38571 399 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 FADDQ13158 208 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 HIST3H3Q16695 136 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 FBLN7Q53RD9 439 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 C6orf10Q5SRN2 563 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 CEP85LQ5SZL2 805 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 SWT1Q5T5J6 900 aaKnown RBP12.39□□□□□ -0.43
UBE2F-216ENST00000445676 FIP1L1Q6UN15 594 aaKnown RBP12.39□□□□□ -0.43
UBE2F-216ENST00000445676 BRD3OSQ6XYD6 125 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 MSANTD1Q6ZTZ1 278 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 KIRREL3Q8IZU9 778 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 C10orf111Q8N326 155 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 NOXO1Q8NFA2 376 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 DACT3Q96B18 629 aaPredicted RBP12.39□□□□□ -0.43
UBE2F-216ENST00000445676 PAIP1Q9H074 479 aaKnown RBP12.39□□□□□ -0.43
UBE2F-216ENST00000445676 RMND5AQ9H871 391 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 MARCH7Q9H992 704 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 CGGBP1Q9UFW8 167 aaPredicted RBP12.39□□□□□ -0.43
UBE2F-216ENST00000445676 LRCH1Q9Y2L9 728 aa12.39□□□□□ -0.43
UBE2F-216ENST00000445676 TET2Q6N021 2002 aaPredicted RBP12.38□□□□□ -0.43
UBE2F-216ENST00000445676 CLIC1O00299 241 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 SLC22A3O75751 556 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 ALX3O95076 343 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 TGDSO95455 350 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 IGHG1P01857 330 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 SELEP16581 610 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 ZNF32P17041 273 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 ZNF84P51523 738 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 CLRN1P58418 232 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 PPP1CBP62140 327 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 CDK5R2Q13319 367 aa12.38□□□□□ -0.43
UBE2F-216ENST00000445676 ZNF74Q16587 644 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms