RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 IZUMO2Q6UXV1 221 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 THSD4Q6ZMP0 1018 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 KRTAP1-3Q8IUG1 177 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 LRRC75AQ8NAA5 344 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 SYT14Q8NB59 555 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 NOXO1Q8NFA2 376 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 TMEM54Q969K7 222 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 MBOAT4Q96T53 435 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 TMEM204Q9BSN7 226 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 RIBC2Q9H4K1 309 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 GLTPQ9NZD2 209 aa15.44■□□□□ 0.06
CCDC188-201ENST00000439765 WNT11O96014 354 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 POU1F1P28069 291 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 EPHA2P29317 976 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 CAPZA2P47755 286 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 CTXN1P60606 82 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 MYBPC1Q00872 1141 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 PTGES3Q15185 160 aaKnown RBP15.43■□□□□ 0.06
CCDC188-201ENST00000439765 KRTAP21-3Q3LHN1 58 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 ARMC4Q5T2S8 1044 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 TMEM108Q6UXF1 575 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 HDDC2Q7Z4H3 204 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
CCDC188-201ENST00000439765 WFDC11Q8NEX6 87 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 OR8D4Q8NGM9 314 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 TEX47Q8TBZ9 253 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 AKAP1Q92667 903 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC188-201ENST00000439765 NEUROG1Q92886 237 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 KATNB1Q9BVA0 655 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 TSSK6Q9BXA6 273 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 GRIP2Q9C0E4 1043 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 IL20RAQ9UHF4 553 aa15.43■□□□□ 0.06
CCDC188-201ENST00000439765 E9PQ18 207 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 TRMUO75648 421 aaKnown RBP15.42■□□□□ 0.06
CCDC188-201ENST00000439765 RPL4P36578 427 aaKnown RBP15.42■□□□□ 0.06
CCDC188-201ENST00000439765 GIPRP48546 466 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 CDK5Q00535 292 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 ZNF813Q6ZN06 617 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 DHRSXQ8N5I4 330 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 OR52L1Q8NGH7 329 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 HTRA1Q92743 480 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 BOD1Q96IK1 185 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 TSPAN32Q96QS1 320 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 TXNIPQ9H3M7 391 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 OBP2BQ9NPH6 170 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 TBC1D23Q9NUY8 699 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 FAM118AQ9NWS6 357 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 ADAM18Q9Y3Q7 739 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 CSPG4Q6UVK1 2322 aa15.42■□□□□ 0.06
CCDC188-201ENST00000439765 ZNF503-AS2A6NEH8 195 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 NPIPB13A6NJU9 1138 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 ZAR1LA6NP61 321 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 NPIPB4C9JG80 1138 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 IGHMP01871 453 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 ACADSP16219 412 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 CD40P25942 277 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 SLC6A6P31641 620 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 RPL27P61353 136 aaKnown RBP15.41■□□□□ 0.06
CCDC188-201ENST00000439765 ERVK-25P63136 954 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 FMODQ06828 376 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 CD47Q08722 323 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 GINS1Q14691 196 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 CLEC12AQ5QGZ9 265 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 SHEQ5VZ18 495 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 LRFN4Q6PJG9 635 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 DPY19L2P2Q6ZN68 376 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 HDAC2Q92769 488 aaKnown RBP15.41■□□□□ 0.06
CCDC188-201ENST00000439765 ZNF570Q96NI8 536 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 GPX7Q96SL4 187 aaPredicted RBP15.41■□□□□ 0.06
CCDC188-201ENST00000439765 FOXB1Q99853 325 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 MRPL13Q9BYD1 178 aaKnown RBP15.41■□□□□ 0.06
CCDC188-201ENST00000439765 NDEL1Q9GZM8 345 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 NRIP3Q9NQ35 241 aa15.41■□□□□ 0.06
CCDC188-201ENST00000439765 ARPC4-TTLL3A0A0A6YYG9 625 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 LOC100130705A0A1B0GUX0 176 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 HS3ST1O14792 307 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 SLC16A6O15403 523 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 CD14P08571 375 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 QDPRP09417 244 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 PTAFRP25105 342 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 ACVR1BP36896 505 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 CDH11P55287 796 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 ADARB1P78563 741 aaKnown RBP15.4■□□□□ 0.06
CCDC188-201ENST00000439765 TMEM236Q5W0B7 351 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 SLC27A4Q6P1M0 643 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 SLC22A25Q6T423 547 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 LRRC75A-AS1Q8N1F1 130 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 ZNF555Q8NEP9 628 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 OR2T33Q8NG76 320 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 LILRB1Q8NHL6 650 aaPredicted RBP15.4■□□□□ 0.06
CCDC188-201ENST00000439765 PIGTQ969N2 578 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 HRASLS5Q96KN8 279 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 ZNF184Q99676 751 aaPredicted RBP15.4■□□□□ 0.06
CCDC188-201ENST00000439765 ADI1Q9BV57 179 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 IFT27Q9BW83 186 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 SLC25A19Q9HC21 320 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 POU2F3Q9UKI9 436 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 ZNF346Q9UL40 294 aaKnown RBP15.4■□□□□ 0.06
CCDC188-201ENST00000439765 SHISA9B4DS77 424 aa15.4■□□□□ 0.06
CCDC188-201ENST00000439765 H0YAE9 185 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms