RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 SNX18Q96RF0 628 aa16.16■□□□□ 0.18
CCDC78-204ENST00000439619 CMTM6Q9NX76 183 aa16.16■□□□□ 0.18
CCDC78-204ENST00000439619 EIF3KQ9UBQ5 218 aaKnown RBP16.16■□□□□ 0.18
CCDC78-204ENST00000439619 A4GNTQ9UNA3 340 aa16.16■□□□□ 0.18
CCDC78-204ENST00000439619 ALPK2Q86TB3 2170 aa16.16■□□□□ 0.18
CCDC78-204ENST00000439619 LRP5LA4QPB2 252 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 EFCAB9A8MZ26 197 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 ACHEP22303 614 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 IGFBP5P24593 272 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 THBS2P35442 1172 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 GPR6P46095 362 aaPredicted RBP16.15■□□□□ 0.18
CCDC78-204ENST00000439619 SLC9A3P48764 834 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 UCP2P55851 309 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 RPL27P61353 136 aaKnown RBP16.15■□□□□ 0.18
CCDC78-204ENST00000439619 MRPS11P82912 194 aaKnown RBP16.15■□□□□ 0.18
CCDC78-204ENST00000439619 RIN1Q13671 783 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 SGCAQ16586 387 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 PCGF3Q3KNV8 242 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 ZNF730Q6ZMV8 503 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 OAFQ86UD1 273 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 LRP11Q86VZ4 500 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 ALDH16A1Q8IZ83 802 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 LINC01356Q8N9X3 169 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 ICA1LQ8NDH6 482 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 NSMAFQ92636 917 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 ZNF416Q9BWM5 594 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 OR51B6Q9H340 312 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 TAAR3PQ9P1P4 343 aa16.15■□□□□ 0.18
CCDC78-204ENST00000439619 PIP5K1CO60331 668 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 GMNNO75496 209 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 SLC2A10O95528 541 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 CCL2P13500 99 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 CCNOP22674 350 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 STOMP27105 288 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 YAP1P46937 504 aaKnown RBP16.14■□□□□ 0.17
CCDC78-204ENST00000439619 SLC7A2P52569 658 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 SEC24CP53992 1094 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 TMEM33P57088 247 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 CTXN1P60606 82 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 PCBD1P61457 104 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 PRKCDQ05655 676 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 MAD2L1BPQ15013 274 aaPredicted RBP16.14■□□□□ 0.17
CCDC78-204ENST00000439619 MSMPQ1L6U9 139 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 PABPC1L2AQ5JQF8 200 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 VTCN1Q7Z7D3 282 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 NRMQ8IXM6 262 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 C1orf174Q8IYL3 243 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 ARIH2OSQ8N7S6 290 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 ACOT11Q8WXI4 607 aaPredicted RBP16.14■□□□□ 0.17
CCDC78-204ENST00000439619 HDAC2Q92769 488 aaKnown RBP16.14■□□□□ 0.17
CCDC78-204ENST00000439619 FAM162AQ96A26 154 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 CMTM5Q96DZ9 223 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 KCTD14Q9BQ13 255 aaPredicted RBP16.14■□□□□ 0.17
CCDC78-204ENST00000439619 HINT3Q9NQE9 182 aaKnown RBP16.14■□□□□ 0.17
CCDC78-204ENST00000439619 RHCGQ9UBD6 479 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 RPS6KA6Q9UK32 745 aa16.14■□□□□ 0.17
CCDC78-204ENST00000439619 FAM32AQ9Y421 112 aaKnown RBP16.14■□□□□ 0.17
CCDC78-204ENST00000439619 ATRQ13535 2644 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 LYNX1G3V0Z9 82 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 PHF1O43189 567 aaPredicted RBP16.13■□□□□ 0.17
CCDC78-204ENST00000439619 LILRA1O75019 489 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 IGHMP01871 453 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 IGFBP1P08833 259 aaPredicted RBP16.13■□□□□ 0.17
CCDC78-204ENST00000439619 LYNX1P0DP58 116 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 NAT2P11245 290 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 ZNF250P15622 560 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 GCH1P30793 250 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 CDAP32320 146 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 RPL4P36578 427 aaKnown RBP16.13■□□□□ 0.17
CCDC78-204ENST00000439619 GDI2P50395 445 aaKnown RBP16.13■□□□□ 0.17
CCDC78-204ENST00000439619 NUDT2P50583 147 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 TEKQ02763 1124 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 FAM27BQ5VT28 67 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 HACD2Q6Y1H2 254 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 CBLL1Q75N03 491 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 OR51A7Q8NH64 312 aa16.13■□□□□ 0.17
CCDC78-204ENST00000439619 ARFGEF3Q5TH69 2177 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 XKRYO14609 159 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 TPD52L2O43399 206 aaKnown RBP16.12■□□□□ 0.17
CCDC78-204ENST00000439619 SERPINA1P01009 418 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 HPXP02790 462 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 MMP7P09237 267 aaPredicted RBP16.12■□□□□ 0.17
CCDC78-204ENST00000439619 FMODQ06828 376 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 ELFN2Q5R3F8 820 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 ARL9Q6T311 187 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 MBOAT2Q6ZWT7 520 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 PAQR4Q8N4S7 273 aaPredicted RBP16.12■□□□□ 0.17
CCDC78-204ENST00000439619 OR1J1Q8NGS3 322 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 HSH2DQ96JZ2 352 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 ANKRD19PQ9H560 264 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 KRCC1Q9NPI7 259 aaPredicted RBP16.12■□□□□ 0.17
CCDC78-204ENST00000439619 DECR2Q9NUI1 292 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 MYEF2Q9P2K5 600 aaKnown RBP16.12■□□□□ 0.17
CCDC78-204ENST00000439619 GRHPRQ9UBQ7 328 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 TMEM5Q9Y2B1 443 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 TIMM10BQ9Y5J6 103 aa16.12■□□□□ 0.17
CCDC78-204ENST00000439619 IGLV3-9A0A075B6K5 115 aa16.11■□□□□ 0.17
CCDC78-204ENST00000439619 TRAV27A0A087WT01 109 aa16.11■□□□□ 0.17
CCDC78-204ENST00000439619 C5orf49A4QMS7 147 aa16.11■□□□□ 0.17
CCDC78-204ENST00000439619 C17orf100A8MU93 164 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms