RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 HRASLS2Q9NWW9 162 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 RASL12Q9NYN1 266 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 CHRNA9Q9UGM1 479 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 CSAG2Q9Y5P2 127 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 A0A0A6YYC8 382 aaPredicted RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 LOC100289279A0A1B0GTE1 492 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 TMEM272A0A1B0GTI8 110 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 TMEM218A2RU14 115 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 I3L1I5 382 aaPredicted RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 SLC16A7O60669 478 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 APBB3O95704 486 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SCGB1D2O95969 90 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SNRPEP62304 92 aaKnown RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 PPIAP62937 165 aaKnown RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 ZNF658BQ4V348 819 aaPredicted RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 ACOT7LQ6ZUV0 252 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SLC16A9Q7RTY1 509 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 FAM122BQ7Z309 247 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 TAF8Q7Z7C8 310 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 TRAPPC6BQ86SZ2 158 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 MCATQ8IVS2 390 aaKnown RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 TMEM52Q8NDY8 209 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 OR4C3Q8NH37 302 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 NUDCD2Q8WVJ2 157 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 PATE1Q8WXA2 126 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 HERVK_113Q902F9 699 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 RAB7BQ96AH8 199 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SLC41A2Q96JW4 573 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 DGAT2Q96PD7 388 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 ZFYVE21Q9BQ24 234 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SLC17A9Q9BYT1 436 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SMIM3Q9BZL3 60 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SELENOIQ9C0D9 397 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 CHMP1AQ9HD42 196 aaPredicted RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 TAS2R4Q9NYW5 299 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 HEBP2Q9Y5Z4 205 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 OTOL1A6NHN0 477 aaPredicted RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 TMEM212A6NML5 194 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 C1orf196B1AJZ1 125 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 PRR32B1ATL7 298 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 ABCD4O14678 606 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 HCRTR2O43614 444 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 RNGTTO60942 597 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 ADAM11O75078 769 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 OR2F2O95006 317 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 FGF19O95750 216 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SERPINA5P05154 406 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 ITGA5P08648 1049 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 S1PR1P21453 382 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 HTR2CP28335 458 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 PEBP1P30086 187 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 MEOX2P50222 304 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 OR2F1Q13607 317 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 ARFRP1Q13795 201 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 TMEM31Q5JXX7 168 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SLC39A5Q6ZMH5 540 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 MARCH3Q86UD3 253 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 LDLRAD3Q86YD5 345 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 CMBLQ96DG6 245 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 C14orf79Q96F83 325 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 TMEM41AQ96HV5 264 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 COX14Q96I36 57 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 C20orf24Q9BUV8 137 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 PRR13Q9NZ81 148 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 MKL2Q9ULH7 1088 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 TMEM14AQ9Y6G1 99 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 H0Y8X5 98 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 DCTN6O00399 190 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SCDO00767 359 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 AKR7A3O95154 331 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 GP1BAP07359 652 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 CD14P08571 375 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SNRNP70P08621 437 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 ERGP11308 486 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 CXCR1P25024 350 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 PPT1P50897 306 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SMAD2Q15796 467 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 PLEKHN1Q494U1 663 aaPredicted RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 DMRTC1Q5HYR2 192 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 ANKRD16Q6P6B7 361 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 PAPD4Q6PIY7 484 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 USP53Q70EK8 1073 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 TMEM200AQ86VY9 491 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 OR1M1Q8NGA1 313 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 OR4K17Q8NGC6 315 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 LCORQ96JN0 433 aaPredicted RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 GPER1Q99527 375 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 WDR13Q9H1Z4 485 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 EXOSC3Q9NQT5 275 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 PNO1Q9NRX1 252 aaKnown RBP8.22□□□□□ -1.09
COPB1-202ENST00000439561 PLXNB3Q9ULL4 1909 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 CDC14CA4D256 554 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 SULT1C2O00338 296 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 MED6O75586 246 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 STK17BO94768 372 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 KAT7O95251 611 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 HTR3BO95264 441 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 WNT11O96014 354 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 PMP2P02689 132 aa8.22□□□□□ -1.09
COPB1-202ENST00000439561 CRYBA1P05813 215 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms