RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TRIM64BA6NI03 449 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 TNFRSF11BO00300 401 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 CDC42EP2O14613 210 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 SMAD7O15105 426 aaKnown RBP9.06□□□□□ -0.96
MCF2L-216ENST00000439475 GYG2O15488 501 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 SLC2A10O95528 541 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 F12P00748 615 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-216ENST00000439475 IGHV4-39P01824 125 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 PATE4P0C8F1 98 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 T-ENOLP0DO92 83 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF35P13682 527 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 APEHP13798 732 aaKnown RBP9.06□□□□□ -0.96
MCF2L-216ENST00000439475 HOXB6P17509 224 aaKnown RBP9.06□□□□□ -0.96
MCF2L-216ENST00000439475 SDHAP31040 664 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 SLC6A6P31641 620 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 THBS4P35443 961 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 RAD52P43351 418 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 LIMS1P48059 325 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 EVX1P49640 407 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 EFNA4P52798 201 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 TRAP1Q12931 704 aaKnown RBP9.06□□□□□ -0.96
MCF2L-216ENST00000439475 TNK1Q13470 666 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 ADIPOQQ15848 244 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 IQCCQ4KMZ1 466 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 DNAL1Q4LDG9 190 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 FAM27BQ5VT28 67 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 LCN8Q6JVE9 175 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 DNM1P34Q6PK57 102 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 SMARCD3Q6STE5 483 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 CLEC9AQ6UXN8 241 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 SLC30A7Q8NEW0 376 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF519Q8TB69 540 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 ASB9Q96DX5 294 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 MS4A3Q96HJ5 214 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 COX4I2Q96KJ9 171 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 Q96M85 177 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF75AQ96N20 296 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 DYNLRB1Q9NP97 96 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 MYOZ1Q9NP98 299 aaPredicted RBP9.06□□□□□ -0.96
MCF2L-216ENST00000439475 NRIP3Q9NQ35 241 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF224Q9NZL3 707 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 GPR160Q9UJ42 338 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 IER3IP1Q9Y5U9 82 aa9.06□□□□□ -0.96
MCF2L-216ENST00000439475 A0A1W2PPL8 197 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 PRSS37A4D1T9 235 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 C12orf71A8MTZ7 269 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 IMPA2O14732 288 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 NDUFS7O75251 213 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 KHDRBS3O75525 346 aaKnown RBP9.05□□□□□ -0.96
MCF2L-216ENST00000439475 CST2P09228 141 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 ZNF32P17041 273 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 CRABP1P29762 137 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 CDAP32320 146 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 PPOXP50336 477 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 RASSF2P50749 326 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 HMGA2P52926 109 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 FMODQ06828 376 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 SEC23BQ15437 767 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 MOGQ16653 247 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 MST1LQ2TV78 715 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 RFX4Q33E94 735 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 RGS7BPQ6MZT1 257 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-216ENST00000439475 RPL13AP3Q6NVV1 102 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 C1orf94Q6P1W5 598 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 ZER1Q7Z7L7 766 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 SYT9Q86SS6 491 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 ADCK1Q86TW2 530 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 C1orf174Q8IYL3 243 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 FGFBP3Q8TAT2 258 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 NEU4Q8WWR8 484 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-216ENST00000439475 C11orf40Q8WZ69 217 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 NMD3Q96D46 503 aaKnown RBP9.05□□□□□ -0.96
MCF2L-216ENST00000439475 GPX7Q96SL4 187 aaPredicted RBP9.05□□□□□ -0.96
MCF2L-216ENST00000439475 DOK1Q99704 481 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 REG4Q9BYZ8 158 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 BCL2L14Q9BZR8 327 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 MS4A5Q9H3V2 200 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 REEP1Q9H902 201 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 EIF3KQ9UBQ5 218 aaKnown RBP9.05□□□□□ -0.96
MCF2L-216ENST00000439475 TIMM10BQ9Y5J6 103 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 CSMD1Q96PZ7 3565 aa9.05□□□□□ -0.96
MCF2L-216ENST00000439475 CSMD2Q7Z408 3487 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 PLCE1Q9P212 2302 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 TEX13CA0A0J9YWL9 993 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 CCNB2O95067 398 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 RENP00797 406 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 TP53P04637 393 aaPredicted RBP9.04□□□□□ -0.96
MCF2L-216ENST00000439475 SLC25A16P16260 332 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 ATP6V1B2P21281 511 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 MSR1P21757 451 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 CCNOP22674 350 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 FPR3P25089 353 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 STOMP27105 288 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 LAP3P28838 519 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 PCSK6P29122 969 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 NOS3P29474 1203 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 GDI2P50395 445 aaKnown RBP9.04□□□□□ -0.96
MCF2L-216ENST00000439475 PDLIM4P50479 330 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 MS4A2Q01362 244 aa9.04□□□□□ -0.96
MCF2L-216ENST00000439475 SCRN3Q0VDG4 424 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms