RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 BPIFA3Q9BQP9 254 aa8.83□□□□□ -1
RTN4-211ENST00000438462 RETNQ9HD89 108 aa8.83□□□□□ -1
RTN4-211ENST00000438462 B3GAT2Q9NPZ5 323 aa8.83□□□□□ -1
RTN4-211ENST00000438462 TBCCD1Q9NVR7 557 aa8.83□□□□□ -1
RTN4-211ENST00000438462 SNX6Q9UNH7 406 aa8.83□□□□□ -1
RTN4-211ENST00000438462 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
RTN4-211ENST00000438462 SORL1Q92673 2214 aa8.82□□□□□ -1
RTN4-211ENST00000438462 LRRC30A6NM36 301 aa8.82□□□□□ -1
RTN4-211ENST00000438462 SYCE1LA8MT33 242 aa8.82□□□□□ -1
RTN4-211ENST00000438462 H3BSA7 217 aa8.82□□□□□ -1
RTN4-211ENST00000438462 ADAM20O43506 726 aa8.82□□□□□ -1
RTN4-211ENST00000438462 CRCPO75575 148 aa8.82□□□□□ -1
RTN4-211ENST00000438462 SNRNP70P08621 437 aaKnown RBP8.82□□□□□ -1
RTN4-211ENST00000438462 RBMY1CP0DJD4 496 aa8.82□□□□□ -1
RTN4-211ENST00000438462 MAPK1P28482 360 aa8.82□□□□□ -1
RTN4-211ENST00000438462 MAP2K6P52564 334 aa8.82□□□□□ -1
RTN4-211ENST00000438462 PPP1CBP62140 327 aa8.82□□□□□ -1
RTN4-211ENST00000438462 HOXA4Q00056 320 aaPredicted RBP8.82□□□□□ -1
RTN4-211ENST00000438462 PLAURQ03405 335 aa8.82□□□□□ -1
RTN4-211ENST00000438462 PSG7Q13046 419 aa8.82□□□□□ -1
RTN4-211ENST00000438462 PMS2P11Q13670 270 aa8.82□□□□□ -1
RTN4-211ENST00000438462 C1DQ13901 141 aaKnown RBP8.82□□□□□ -1
RTN4-211ENST00000438462 ZNF181Q2M3W8 571 aa8.82□□□□□ -1
RTN4-211ENST00000438462 ZNF260Q3ZCT1 412 aa8.82□□□□□ -1
RTN4-211ENST00000438462 HP1BP3Q5SSJ5 553 aaPredicted RBP8.82□□□□□ -1
RTN4-211ENST00000438462 LGALS9CQ6DKI2 356 aa8.82□□□□□ -1
RTN4-211ENST00000438462 ANKRD26P1Q6NSI1 321 aa8.82□□□□□ -1
RTN4-211ENST00000438462 LETMD1Q6P1Q0 360 aa8.82□□□□□ -1
RTN4-211ENST00000438462 ARL9Q6T311 187 aa8.82□□□□□ -1
RTN4-211ENST00000438462 OR2W3Q7Z3T1 314 aa8.82□□□□□ -1
RTN4-211ENST00000438462 ZER1Q7Z7L7 766 aa8.82□□□□□ -1
RTN4-211ENST00000438462 CMTM4Q8IZR5 234 aa8.82□□□□□ -1
RTN4-211ENST00000438462 MIER2Q8N344 545 aa8.82□□□□□ -1
RTN4-211ENST00000438462 SLC22A24Q8N4F4 322 aa8.82□□□□□ -1
RTN4-211ENST00000438462 NAT8LQ8N9F0 302 aa8.82□□□□□ -1
RTN4-211ENST00000438462 HIPK4Q8NE63 616 aa8.82□□□□□ -1
RTN4-211ENST00000438462 KLHL30-AS1Q8NEE0 82 aa8.82□□□□□ -1
RTN4-211ENST00000438462 OR10AD1Q8NGE0 317 aa8.82□□□□□ -1
RTN4-211ENST00000438462 CLHC1Q8NHS4 586 aa8.82□□□□□ -1
RTN4-211ENST00000438462 PNPT1Q8TCS8 783 aaKnown RBP8.82□□□□□ -1
RTN4-211ENST00000438462 FAM120BQ96EK7 910 aaKnown RBP8.82□□□□□ -1
RTN4-211ENST00000438462 MEGF10Q96KG7 1140 aa8.82□□□□□ -1
RTN4-211ENST00000438462 FAM110AQ9BQ89 295 aa8.82□□□□□ -1
RTN4-211ENST00000438462 NAT9Q9BTE0 207 aa8.82□□□□□ -1
RTN4-211ENST00000438462 MECRQ9BV79 373 aa8.82□□□□□ -1
RTN4-211ENST00000438462 HIPK2Q9H2X6 1198 aa8.82□□□□□ -1
RTN4-211ENST00000438462 SCRT2Q9NQ03 307 aa8.82□□□□□ -1
RTN4-211ENST00000438462 ZCCHC3Q9NUD5 404 aaKnown RBP8.82□□□□□ -1
RTN4-211ENST00000438462 MKS1Q9NXB0 559 aa8.82□□□□□ -1
RTN4-211ENST00000438462 MFAP3LO75121 409 aa8.81□□□□□ -1
RTN4-211ENST00000438462 KRT14P02533 472 aa8.81□□□□□ -1
RTN4-211ENST00000438462 IGHV4-30-4P0DP06 118 aa8.81□□□□□ -1
RTN4-211ENST00000438462 PLP2Q04941 152 aa8.81□□□□□ -1
RTN4-211ENST00000438462 BNIP2Q12982 314 aa8.81□□□□□ -1
RTN4-211ENST00000438462 SNX32Q86XE0 403 aa8.81□□□□□ -1
RTN4-211ENST00000438462 ZFP28Q8NHY6 868 aa8.81□□□□□ -1
RTN4-211ENST00000438462 ST8SIA4Q92187 359 aa8.81□□□□□ -1
RTN4-211ENST00000438462 RNFT2Q96EX2 444 aa8.81□□□□□ -1
RTN4-211ENST00000438462 HES6Q96HZ4 224 aa8.81□□□□□ -1
RTN4-211ENST00000438462 OXGR1Q96P68 337 aa8.81□□□□□ -1
RTN4-211ENST00000438462 EMC6Q9BV81 110 aa8.81□□□□□ -1
RTN4-211ENST00000438462 ACPTQ9BZG2 426 aa8.81□□□□□ -1
RTN4-211ENST00000438462 NMRAL1Q9HBL8 299 aa8.81□□□□□ -1
RTN4-211ENST00000438462 MAN2C1Q9NTJ4 1040 aa8.81□□□□□ -1
RTN4-211ENST00000438462 EIF3KQ9UBQ5 218 aaKnown RBP8.81□□□□□ -1
RTN4-211ENST00000438462 SLC35A3Q9Y2D2 325 aa8.81□□□□□ -1
RTN4-211ENST00000438462 TNPO3Q9Y5L0 923 aaKnown RBP8.81□□□□□ -1
RTN4-211ENST00000438462 MYCBP2O75592 4640 aa8.81□□□□□ -1
RTN4-211ENST00000438462 HMCN2Q8NDA2 5059 aa8.8□□□□□ -1
RTN4-211ENST00000438462 A6NDX4 124 aa8.8□□□□□ -1
RTN4-211ENST00000438462 CXorf65A6NEN9 183 aa8.8□□□□□ -1
RTN4-211ENST00000438462 NUPR2A6NF83 97 aa8.8□□□□□ -1
RTN4-211ENST00000438462 CDK2AP2O75956 126 aa8.8□□□□□ -1
RTN4-211ENST00000438462 ECDO95905 644 aaPredicted RBP8.8□□□□□ -1
RTN4-211ENST00000438462 HSD3B1P14060 373 aa8.8□□□□□ -1
RTN4-211ENST00000438462 HSD3B2P26439 372 aa8.8□□□□□ -1
RTN4-211ENST00000438462 BTKQ06187 659 aa8.8□□□□□ -1
RTN4-211ENST00000438462 MGAT5Q09328 741 aa8.8□□□□□ -1
RTN4-211ENST00000438462 ZKSCAN8Q15776 578 aaPredicted RBP8.8□□□□□ -1
RTN4-211ENST00000438462 MAPK14Q16539 360 aa8.8□□□□□ -1
RTN4-211ENST00000438462 SRSF7Q16629 238 aaKnown RBP eCLIP8.8□□□□□ -1
RTN4-211ENST00000438462 FAM27D1Q5T7N8 215 aa8.8□□□□□ -1
RTN4-211ENST00000438462 UNQ6126/PRO20091Q6UXV3 157 aa8.8□□□□□ -1
RTN4-211ENST00000438462 COLCA1Q6ZS62 124 aa8.8□□□□□ -1
RTN4-211ENST00000438462 FGFRL1Q8N441 504 aa8.8□□□□□ -1
RTN4-211ENST00000438462 ARFGAP2Q8N6H7 521 aa8.8□□□□□ -1
RTN4-211ENST00000438462 RAX2Q96IS3 184 aa8.8□□□□□ -1
RTN4-211ENST00000438462 SDF2Q99470 211 aa8.8□□□□□ -1
RTN4-211ENST00000438462 NABP2Q9BQ15 211 aa8.8□□□□□ -1
RTN4-211ENST00000438462 IQCGQ9H095 443 aaKnown RBP8.8□□□□□ -1
RTN4-211ENST00000438462 KIAA1456Q9P272 454 aa8.8□□□□□ -1
RTN4-211ENST00000438462 CPSF2Q9P2I0 782 aaKnown RBP8.8□□□□□ -1
RTN4-211ENST00000438462 MKLN1Q9UL63 735 aa8.8□□□□□ -1
RTN4-211ENST00000438462 CHMP2BQ9UQN3 213 aa8.8□□□□□ -1
RTN4-211ENST00000438462 PIAS1O75925 651 aa8.79□□□□□ -1
RTN4-211ENST00000438462 G6PDP11413 515 aa8.79□□□□□ -1
RTN4-211ENST00000438462 RAB13P51153 203 aa8.79□□□□□ -1
RTN4-211ENST00000438462 PRR20EP86478 221 aa8.79□□□□□ -1
RTN4-211ENST00000438462 PRR20CP86479 221 aa8.79□□□□□ -1
RTN4-211ENST00000438462 PRR20DP86480 221 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms