RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 ROPN1BQ9BZX4 212 aaPredicted RBP12.48□□□□□ -0.41
HDAC8-213ENST00000436675 OR2J1Q9GZK6 312 aa12.48□□□□□ -0.41
HDAC8-213ENST00000436675 PAIP1Q9H074 479 aaKnown RBP12.48□□□□□ -0.41
HDAC8-213ENST00000436675 ROPN1Q9HAT0 212 aaPredicted RBP12.48□□□□□ -0.41
HDAC8-213ENST00000436675 PATZ1Q9HBE1 687 aaKnown RBP12.48□□□□□ -0.41
HDAC8-213ENST00000436675 TAS2R5Q9NYW4 299 aa12.48□□□□□ -0.41
HDAC8-213ENST00000436675 SLC13A4Q9UKG4 626 aa12.48□□□□□ -0.41
HDAC8-213ENST00000436675 TRIM33Q9UPN9 1127 aa12.48□□□□□ -0.41
HDAC8-213ENST00000436675 C5orf49A4QMS7 147 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 KPNA4O00629 521 aaPredicted RBP12.47□□□□□ -0.41
HDAC8-213ENST00000436675 HOXA3O43365 443 aaPredicted RBP12.47□□□□□ -0.41
HDAC8-213ENST00000436675 MT-ATP6P00846 226 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 MMP7P09237 267 aaPredicted RBP12.47□□□□□ -0.41
HDAC8-213ENST00000436675 IDO1P14902 403 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 STOMP27105 288 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 AQP1P29972 269 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 CDAP32320 146 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 CD80P33681 288 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 SLC6A9P48067 706 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 ZNF84P51523 738 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 POLR2JP52435 117 aaKnown RBP12.47□□□□□ -0.41
HDAC8-213ENST00000436675 TNFAIP6P98066 277 aaPredicted RBP12.47□□□□□ -0.41
HDAC8-213ENST00000436675 GCNT6Q5T4J0 391 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 DPPA2Q7Z7J5 298 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 KRT73Q86Y46 540 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 C10orf111Q8N326 155 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 SPICQ8N5J4 248 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 HIPK4Q8NE63 616 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 AKR7LQ8NHP1 331 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 KLF14Q8TD94 323 aaPredicted RBP12.47□□□□□ -0.41
HDAC8-213ENST00000436675 MCHR2Q969V1 340 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 RAD21L1Q9H4I0 556 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 CCNB1IP1Q9NPC3 277 aa12.47□□□□□ -0.41
HDAC8-213ENST00000436675 EIF3KQ9UBQ5 218 aaKnown RBP12.47□□□□□ -0.41
HDAC8-213ENST00000436675 LOC100509620A0A075B734 347 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 FAM181BA6NEQ2 426 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 M0R3H8 397 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 BMP2P12643 396 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 ZNF32P17041 273 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 RAG2P55895 527 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 CDK6Q00534 326 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 REEP3Q6NUK4 255 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 RFPL4BQ6ZWI9 263 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 KIRREL3Q8IZU9 778 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 ABHD4Q8TB40 342 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 GTF2H4Q92759 462 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 MCHR1Q99705 422 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 SPATA5L1Q9BVQ7 753 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 BEX1Q9HBH7 125 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 TMEM106BQ9NUM4 274 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 OR5V1Q9UGF6 321 aa12.46□□□□□ -0.41
HDAC8-213ENST00000436675 TRAV40A0A0B4J280 105 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 HDAC3O15379 428 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 TGDSO95455 350 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 SLC2A10O95528 541 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 NGFP01138 241 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 IGHG1P01857 330 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 UMPSP11172 480 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 GDI2P50395 445 aaKnown RBP12.45□□□□□ -0.42
HDAC8-213ENST00000436675 PPP1CBP62140 327 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 PAX8Q06710 450 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 FADDQ13158 208 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 MPP2Q14168 576 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 ZMYND11Q15326 602 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 SGCAQ16586 387 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 ZNF74Q16587 644 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 OCLNQ16625 522 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 ESCO2Q56NI9 601 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 MSANTD1Q6ZTZ1 278 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 RANBP3LQ86VV4 465 aaPredicted RBP12.45□□□□□ -0.42
HDAC8-213ENST00000436675 POM121L2Q96KW2 1035 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 ARHGDIGQ99819 225 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 KCNN2Q9H2S1 579 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 MMP27Q9H306 513 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 MARCH7Q9H992 704 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 KCNK9Q9NPC2 374 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 NANSQ9NR45 359 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 CYSLTR2Q9NS75 346 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 ZIM2Q9NZV7 527 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 ZDHHC8Q9ULC8 765 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 POLR3KQ9Y2Y1 108 aaPredicted RBP12.45□□□□□ -0.42
HDAC8-213ENST00000436675 MMP24Q9Y5R2 645 aa12.45□□□□□ -0.42
HDAC8-213ENST00000436675 TRPC5OSA6NMA1 111 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 CPSF4LA6NMK7 179 aaKnown RBP12.44□□□□□ -0.42
HDAC8-213ENST00000436675 MCIDASD6RGH6 385 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 BLOC1S5-TXNDC5H3BN57 136 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 M0QZ24 198 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 TIMM8AO60220 97 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-213ENST00000436675 MGRN1O60291 552 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 HIST1H2ABP04908 130 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 F13BP05160 661 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 CRYBA1P05813 215 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 ADH4P08319 380 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 BTG1P62324 171 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 ERVK-25P63136 954 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 DEFB112Q30KQ8 113 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 KRT71Q3SY84 523 aa12.44□□□□□ -0.42
HDAC8-213ENST00000436675 HHATQ5VTY9 493 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms