RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 ELSPBP1Q96BH3 223 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 CENPOQ9BU64 300 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 SEMA4CQ9C0C4 833 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 ADAM19Q9H013 955 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 R3HDMLQ9H3Y0 253 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 OR51B4Q9Y5P0 310 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 LOC100289279A0A1B0GTE1 492 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 A0A1W2PNR3 127 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 SLC5A10A0PJK1 596 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 SMLR1H3BR10 107 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 K7EQM0 130 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 CD14P08571 375 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 NPPBP16860 134 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 IAH1Q2TAA2 248 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-206ENST00000429895 CREB3L2Q70SY1 520 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 MENTQ9BUN1 341 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 ARRDC1-AS1Q9H2J1 176 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 PROCRQ9UNN8 238 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 F6UZH7 168 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 TSTD3H0UI37 97 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 BHLHE40O14503 412 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 ZNF626Q68DY1 528 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 ADGRE4PQ86SQ3 457 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 CHTF18Q8WVB6 975 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 MED18Q9BUE0 208 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 EDEM2Q9BV94 578 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 POFUT1Q9H488 388 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 KIAA1456Q9P272 454 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 ZFP92A6NM28 416 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 STMND1H3BQB6 276 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 PRKNO60260 465 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-206ENST00000429895 IL2RAP01589 272 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 ADIRFQ15847 76 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 LSMEM2Q8N112 164 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 C15orf54Q8N8G6 183 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 L3MBTL4Q8NA19 623 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 SMAP2Q8WU79 429 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-206ENST00000429895 TMEM43Q9BTV4 400 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 RIMS4Q9H426 269 aaPredicted RBP14.13□□□□□ -0.15
PTPRF-206ENST00000429895 TAS2R5Q9NYW4 299 aa14.13□□□□□ -0.15
PTPRF-206ENST00000429895 FOXC1Q12948 553 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 ENTHD1Q8IYW4 607 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 ARSGQ96EG1 525 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 CHST8Q9H2A9 424 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 UBE2ZQ9H832 354 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-206ENST00000429895 NT5DC2Q9H857 520 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 MUTYHQ9UIF7 546 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 SIGLEC1Q9BZZ2 1709 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 M0R082 166 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 LGI1O95970 557 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 CSF3P09919 207 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 TBPP20226 339 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 SRPXP78539 464 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 GRINAQ7Z429 371 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 EGFL6Q8IUX8 553 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 SIAH3Q8IW03 269 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 CPEB3Q8NE35 698 aaKnown RBP14.12□□□□□ -0.15
PTPRF-206ENST00000429895 FCRL1Q96LA6 429 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 C5orf49A4QMS7 147 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 SCG5P05408 212 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 FLI1Q01543 452 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-206ENST00000429895 DUSP5Q16690 384 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 CORO6Q6QEF8 472 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 OR5M11Q96RB7 305 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 RAB22AQ9UL26 194 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 CLDN24A6NM45 220 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 C4orf47A7E2U8 309 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 GLCEO94923 617 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 QDPRP09417 244 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 PSMB1P20618 241 aaKnown RBP14.12□□□□□ -0.15
PTPRF-206ENST00000429895 ZNF133P52736 654 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-206ENST00000429895 RPL27P61353 136 aaKnown RBP14.12□□□□□ -0.15
PTPRF-206ENST00000429895 PRAMEF5Q5TYX0 476 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 PRAMEF6Q5VXH4 476 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 RETREG3Q86VR2 466 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 CSF3RQ99062 836 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 RGPD8O14715 1765 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-206ENST00000429895 HBE1P02100 147 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 SRMP19623 302 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 HNF1AP20823 631 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 FAM26DQ5JW98 314 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 PRSS45Q7RTY3 260 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 MDGA2Q7Z553 956 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 RBM45Q8IUH3 476 aaKnown RBP14.12□□□□□ -0.15
PTPRF-206ENST00000429895 OR51A4Q8NGJ6 313 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 OR51A2Q8NGJ7 313 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 PSORS1C1Q9UIG5 152 aa14.12□□□□□ -0.15
PTPRF-206ENST00000429895 SLCO2B1O94956 709 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 SELEP16581 610 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 KIAA1024LP59773 190 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 BTN1A1Q13410 526 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 ZNF583Q96ND8 569 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 PARP12Q9H0J9 701 aaKnown RBP14.11□□□□□ -0.15
PTPRF-206ENST00000429895 CACNA1FO60840 1977 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 PLPP1O14494 284 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 ABCD4O14678 606 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 CLEC2LP0C7M8 214 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 MTNR1BP49286 362 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 HSF1Q00613 529 aa14.11□□□□□ -0.15
PTPRF-206ENST00000429895 RELAQ04206 551 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms