RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SCAF4O95104 1147 aaKnown RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 AVPR2P30518 371 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 THBS2P35442 1172 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 AKR1D1P51857 326 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 GFERP55789 205 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 TAS2R20P59543 309 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 PRPS1P60891 318 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 BDH1Q02338 343 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 Q499Y3 187 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 TMEM255AQ5JRV8 349 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 KRBOX4Q5JUW0 171 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 STAC2Q6ZMT1 411 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 MARCH3Q86UD3 253 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ARMC10Q8N2F6 343 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ACBD4Q8NC06 268 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 RELL2Q8NC24 303 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 GPR148Q8TDV2 347 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 TSLPQ969D9 159 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 KTI12Q96EK9 354 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 WDR89Q96FK6 387 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 ZC3HAV1LQ96H79 300 aaKnown RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 OR1F2PQ96R84 312 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 INTS14Q96SY0 518 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 STACQ99469 402 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 KCNJ15Q99712 375 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 SLC6A7Q99884 636 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 NUDT22Q9BRQ3 303 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 PTDSS2Q9BVG9 487 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 ZNF471Q9BX82 626 aaPredicted RBP7.33□□□□□ -1.24
HPS4-205ENST00000429411 OR11A1Q9GZK7 315 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 TRPV4Q9HBA0 871 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 DHDHQ9UQ10 334 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 KIF26BQ2KJY2 2108 aa7.33□□□□□ -1.24
HPS4-205ENST00000429411 IGHV3-20A0A0C4DH32 117 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 OR5K4A6NMS3 321 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 PYCARD-AS1I3L0S3 204 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 OIP5O43482 229 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 CD14P08571 375 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 PRSS3P35030 304 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 NUP62P37198 522 aaPredicted RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 DHPSP49366 369 aaPredicted RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 MMP15P51511 669 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 SSTP61278 116 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 RPS15P62841 145 aaKnown RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 RPL18Q07020 188 aaKnown RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 TNK1Q13470 666 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ALKBH1Q13686 389 aaKnown RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 B3GNTL1Q67FW5 361 aaPredicted RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 TMEM92Q6UXU6 159 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 C17orf107Q6ZR85 190 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 GPAT4Q86UL3 456 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 C19orf47Q8N9M1 422 aaKnown RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 TSTD1Q8NFU3 115 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 NXF5Q9H1B4 397 aaKnown RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 IFT22Q9H7X7 185 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 CA10Q9NS85 328 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 B3GNT2Q9NY97 397 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 OR5V1Q9UGF6 321 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ENTPD2Q9Y5L3 495 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 TEX51A0A1B0GUA7 166 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 C5orf51A6NDU8 294 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 CYR61O00622 381 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 KLF4O43474 513 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 GLCEO94923 617 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 IFNA6P05013 189 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 CFIP05156 583 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 GP1BBP13224 206 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 SELLP14151 372 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ZNF28P17035 718 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 PTBP1P26599 531 aaKnown RBP eCLIP7.32□□□□□ -1.24
HPS4-205ENST00000429411 P2RX1P51575 399 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 PRKXP51817 358 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 PLCXD2Q0VAA5 305 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 CD226Q15762 336 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 COL28A1Q2UY09 1125 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 CDNFQ49AH0 187 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 CARD17Q5XLA6 110 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 OLFML2AQ68BL7 652 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 DPY19L2P2Q6ZN68 376 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 C16orf47Q6ZP98 133 aaPredicted RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 MDGA2Q7Z553 956 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ZNF101Q8IZC7 436 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 OR10H5Q8NGA6 315 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ANKRD9Q96BM1 317 aaPredicted RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 SCMH1Q96GD3 660 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ZNF764Q96H86 408 aaPredicted RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 GPER1Q99527 375 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 LYRM4Q9HD34 91 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ZFP64Q9NPA5 681 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ST6GALNAC2Q9UJ37 374 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 KLHDC2Q9Y2U9 406 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 EEF1E1-BLOC1S5C9J1V9 151 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 AIPO00170 330 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 ZNF264O43296 627 aa7.32□□□□□ -1.24
HPS4-205ENST00000429411 POU3F2P20265 443 aaPredicted RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 NFYAP23511 347 aaPredicted RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 ACAA2P42765 397 aaKnown RBP7.32□□□□□ -1.24
HPS4-205ENST00000429411 KIR2DL1P43626 348 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms