RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ARIH2OSQ8N7S6 290 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 NUP37Q8NFH4 326 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 NABP1Q96AH0 204 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 CCDC124Q96CT7 223 aaKnown RBP12.85□□□□□ -0.35
RTN4-210ENST00000427710 ZNF570Q96NI8 536 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 RBP7Q96R05 134 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 MOV10Q9HCE1 1003 aaKnown RBP12.85□□□□□ -0.35
RTN4-210ENST00000427710 STX18Q9P2W9 335 aaKnown RBP12.85□□□□□ -0.35
RTN4-210ENST00000427710 GRHPRQ9UBQ7 328 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 FZR1Q9UM11 496 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 IER3IP1Q9Y5U9 82 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 ABCA2Q9BZC7 2435 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 FN1P02751 2386 aaKnown RBP12.85□□□□□ -0.35
RTN4-210ENST00000427710 TEX13CA0A0J9YWL9 993 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 TMEM129A0AVI4 362 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 A6NIZ1 184 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 OR10H3O60404 316 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 NDUFB2O95178 105 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 MMP7P09237 267 aaPredicted RBP12.84□□□□□ -0.35
RTN4-210ENST00000427710 NR4A1P22736 598 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 RAP1BP61224 184 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 RAP1AP62834 184 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 TRIM25Q14258 630 aaKnown RBP12.84□□□□□ -0.35
RTN4-210ENST00000427710 ANKDD1AQ495B1 522 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 LCN8Q6JVE9 175 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 FAM122BQ7Z309 247 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 ZCCHC24Q8N2G6 241 aaKnown RBP12.84□□□□□ -0.35
RTN4-210ENST00000427710 SVOPLQ8N434 492 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 SORCS2Q96PQ0 1159 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 VRK1Q99986 396 aaPredicted RBP12.84□□□□□ -0.35
RTN4-210ENST00000427710 DENND2DQ9H6A0 471 aaPredicted RBP12.84□□□□□ -0.35
RTN4-210ENST00000427710 VNN3Q9NY84 501 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 PMF1-BGLAPU3KQ54 211 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 MALRD1Q5VYJ5 2156 aa12.84□□□□□ -0.35
RTN4-210ENST00000427710 IGHV4-30-2A0A087WSY4 118 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 SLC22A23A1A5C7 686 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 SOCS2O14508 198 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 MGRN1O60291 552 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 PPP1R3DO95685 299 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 SERPINA5P05154 406 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 FAM157BP0CG42 384 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 ZNF32P17041 273 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 NPR2P20594 1047 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 APEX1P27695 318 aaKnown RBP12.83□□□□□ -0.36
RTN4-210ENST00000427710 LAP3P28838 519 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 SMIM11AP58511 58 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 SNRPD2P62316 118 aaKnown RBP12.83□□□□□ -0.36
RTN4-210ENST00000427710 MRPS34P82930 218 aaKnown RBP12.83□□□□□ -0.36
RTN4-210ENST00000427710 KRR1Q13601 381 aaKnown RBP12.83□□□□□ -0.36
RTN4-210ENST00000427710 SLC36A2Q495M3 483 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 THEM4Q5T1C6 240 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 FAM205BPQ63HN1 556 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 UGT2A3Q6UWM9 527 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 CLEC9AQ6UXN8 241 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 PTCHD4Q6ZW05 846 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 BIVMQ86UB2 503 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 LRP11Q86VZ4 500 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 ARHGAP24Q8N264 748 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 ZNF525Q8N782 197 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 SLC30A7Q8NEW0 376 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 OR9Q2Q8NGE9 314 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 AKR7LQ8NHP1 331 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 FANK1Q8TC84 345 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 SYT3Q9BQG1 590 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 RERGLQ9H628 205 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 SIAEQ9HAT2 523 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 EMC7Q9NPA0 242 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 CCNB1IP1Q9NPC3 277 aa12.83□□□□□ -0.36
RTN4-210ENST00000427710 KRCC1Q9NPI7 259 aaPredicted RBP12.83□□□□□ -0.36
RTN4-210ENST00000427710 PRPF19Q9UMS4 504 aaKnown RBP12.83□□□□□ -0.36
RTN4-210ENST00000427710 NIPBLQ6KC79 2804 aaeCLIP12.82□□□□□ -0.36
RTN4-210ENST00000427710 B9A039 149 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 H7C417 338 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 TNFRSF11BO00300 401 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 XKRYO14609 159 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 CTLA4P16410 223 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 GALK2Q01415 458 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 HSF2Q03933 536 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 PABPC1L2AQ5JQF8 200 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 PGBD2Q6P3X8 592 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 DNM1P46Q6ZS02 220 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 CPEB3Q8NE35 698 aaKnown RBP12.82□□□□□ -0.36
RTN4-210ENST00000427710 SAMD8Q96LT4 415 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 REG4Q9BYZ8 158 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 MRPL37Q9BZE1 423 aaKnown RBP12.82□□□□□ -0.36
RTN4-210ENST00000427710 KCNN2Q9H2S1 579 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 PLK3Q9H4B4 646 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 ZNF442Q9H7R0 627 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 SMURF2Q9HAU4 748 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 CDH20Q9HBT6 801 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 BARX1Q9HBU1 254 aaPredicted RBP12.82□□□□□ -0.36
RTN4-210ENST00000427710 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 MYEF2Q9P2K5 600 aaKnown RBP12.82□□□□□ -0.36
RTN4-210ENST00000427710 TMCC3Q9ULS5 477 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 CMAHPQ9Y471 501 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 LYVE1Q9Y5Y7 322 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 HIVEP2P31629 2446 aa12.82□□□□□ -0.36
RTN4-210ENST00000427710 NSD1Q96L73 2696 aaPredicted RBP12.82□□□□□ -0.36
RTN4-210ENST00000427710 PRSS37A4D1T9 235 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms