RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 VRK1Q99986 396 aaPredicted RBP16.5■□□□□ 0.23
COL9A2-204ENST00000427563 ALG12Q9BV10 488 aa16.5■□□□□ 0.23
COL9A2-204ENST00000427563 MYEF2Q9P2K5 600 aaKnown RBP16.5■□□□□ 0.23
COL9A2-204ENST00000427563 ADAM18Q9Y3Q7 739 aa16.5■□□□□ 0.23
COL9A2-204ENST00000427563 EBAG9O00559 213 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 PTP4A3O75365 173 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 SCG5P05408 212 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 H1F0P07305 194 aaKnown RBP16.49■□□□□ 0.23
COL9A2-204ENST00000427563 RHCEP18577 417 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 GLRXP35754 106 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 SLC9A3P48764 834 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 ZNF84P51523 738 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 ERVK-25P63136 954 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 CD47Q08722 323 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 TAF11Q15544 211 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 FOXL2NBQ6ZUU3 175 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 SLC16A14Q7RTX9 510 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 FAM122BQ7Z309 247 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 SMURF2Q9HAU4 748 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 FZR1Q9UM11 496 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 SAMD4AQ9UPU9 718 aaKnown RBP16.49■□□□□ 0.23
COL9A2-204ENST00000427563 CUBNO60494 3623 aa16.49■□□□□ 0.23
COL9A2-204ENST00000427563 SH3PXD2BA1X283 911 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 H7C1C5 153 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 IMPA2O14732 288 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 ARPC2O15144 300 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 ATP5HO75947 161 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 FARS2O95363 451 aaKnown RBP16.48■□□□□ 0.23
COL9A2-204ENST00000427563 LCN6P62502 163 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 LOXL1Q08397 574 aaPredicted RBP16.48■□□□□ 0.23
COL9A2-204ENST00000427563 ANKDD1AQ495B1 522 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 ZBED5Q49AG3 693 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 MESTQ5EB52 335 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 THSD4Q6ZMP0 1018 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 CYP4Z1Q86W10 505 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 PRIMA1Q86XR5 153 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 CPEB3Q8NE35 698 aaKnown RBP16.48■□□□□ 0.23
COL9A2-204ENST00000427563 SLC30A7Q8NEW0 376 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 PYURFQ96I23 114 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 Q96M85 177 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 SIAEQ9HAT2 523 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 STX18Q9P2W9 335 aaKnown RBP16.48■□□□□ 0.23
COL9A2-204ENST00000427563 SIGLEC7Q9Y286 467 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 CMAHPQ9Y471 501 aa16.48■□□□□ 0.23
COL9A2-204ENST00000427563 CD5LO43866 347 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 SLC25A16P16260 332 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 ERVS71-1P61550 626 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 SAMD4BQ5PRF9 694 aaKnown RBP16.47■□□□□ 0.23
COL9A2-204ENST00000427563 CCDC121Q6ZUS5 278 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 ARIH2OSQ8N7S6 290 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 OR52J3Q8NH60 311 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 SYT3Q9BQG1 590 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 RNF121Q9H920 327 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 SLC7A8Q9UHI5 535 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 MAGEL2Q9UJ55 1249 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 FBXL3Q9UKT7 428 aa16.47■□□□□ 0.23
COL9A2-204ENST00000427563 GYG2O15488 501 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 CD14P08571 375 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 FAM157BP0CG42 384 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 ZNF32P17041 273 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 APEX1P27695 318 aaKnown RBP16.46■□□□□ 0.23
COL9A2-204ENST00000427563 PDLIM4P50479 330 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 MAD2L1BPQ15013 274 aaPredicted RBP16.46■□□□□ 0.23
COL9A2-204ENST00000427563 TMEM249Q2WGJ8 235 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 SLC36A2Q495M3 483 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 DNAL1Q4LDG9 190 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 PABPC1L2AQ5JQF8 200 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 FGD3Q5JSP0 725 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 THEM4Q5T1C6 240 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 TMEM53Q6P2H8 277 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 DPPA2Q7Z7J5 298 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 FOXN4Q96NZ1 517 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 BTBD10Q9BSF8 475 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 TPK1Q9H3S4 243 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 IL20RAQ9UHF4 553 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 PRPF19Q9UMS4 504 aaKnown RBP16.46■□□□□ 0.23
COL9A2-204ENST00000427563 TMEM5Q9Y2B1 443 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 FKBP7Q9Y680 259 aa16.46■□□□□ 0.23
COL9A2-204ENST00000427563 MALRD1Q5VYJ5 2156 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 SLC22A23A1A5C7 686 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 ENTPD5O75356 428 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 ADRA2AP08913 450 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 CSF3P09919 207 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 ATP6V1B2P21281 511 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 EVX1P49640 407 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 PSG4Q00888 419 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 ENDOGQ14249 297 aaKnown RBP16.45■□□□□ 0.22
COL9A2-204ENST00000427563 SGCAQ16586 387 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 SPATS1Q496A3 300 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 TMEM255AQ5JRV8 349 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 FAM27BQ5VT28 67 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 FAM205BPQ63HN1 556 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 ARHGAP24Q8N264 748 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 AKR7LQ8NHP1 331 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 RASD2Q96D21 266 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 NSMCE2Q96MF7 247 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 GPX7Q96SL4 187 aaPredicted RBP16.45■□□□□ 0.22
COL9A2-204ENST00000427563 WNT5BQ9H1J7 359 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 OR51B6Q9H340 312 aa16.45■□□□□ 0.22
COL9A2-204ENST00000427563 FAM32AQ9Y421 112 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms