RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 GLYATL3Q5SZD4 288 aa15.08■□□□□ 0
PKP4-204ENST00000421462 FAM122BQ7Z309 247 aa15.08■□□□□ 0
PKP4-204ENST00000421462 ROBO4Q8WZ75 1007 aa15.08■□□□□ 0
PKP4-204ENST00000421462 ARL11Q969Q4 196 aa15.08■□□□□ 0
PKP4-204ENST00000421462 FAM46BQ96A09 425 aa15.08■□□□□ 0
PKP4-204ENST00000421462 GAL3ST3Q96A11 431 aa15.08■□□□□ 0
PKP4-204ENST00000421462 SEH1LQ96EE3 360 aa15.08■□□□□ 0
PKP4-204ENST00000421462 CST11Q9H112 138 aa15.08■□□□□ 0
PKP4-204ENST00000421462 TBC1D3DA0A087WVF3 549 aa15.08■□□□□ 0
PKP4-204ENST00000421462 TBC1D3IA0A087WXS9 549 aa15.08■□□□□ 0
PKP4-204ENST00000421462 A0A0A6YYC8 382 aaPredicted RBP15.08■□□□□ 0
PKP4-204ENST00000421462 TBC1D3LB9A6J9 549 aa15.08■□□□□ 0
PKP4-204ENST00000421462 I3L1I5 382 aaPredicted RBP15.08■□□□□ 0
PKP4-204ENST00000421462 SRPX2O60687 465 aaPredicted RBP15.08■□□□□ 0
PKP4-204ENST00000421462 SNAPINO95295 136 aa15.08■□□□□ 0
PKP4-204ENST00000421462 CISD3P0C7P0 127 aa15.08■□□□□ 0
PKP4-204ENST00000421462 TBC1D3HP0C7X1 549 aa15.08■□□□□ 0
PKP4-204ENST00000421462 MAP3K8P41279 467 aa15.08■□□□□ 0
PKP4-204ENST00000421462 INPP5JQ15735 1006 aaPredicted RBP15.08■□□□□ 0
PKP4-204ENST00000421462 CEBPEQ15744 281 aa15.08■□□□□ 0
PKP4-204ENST00000421462 LHX8Q68G74 356 aa15.08■□□□□ 0
PKP4-204ENST00000421462 TBC1D3CQ6IPX1 549 aa15.08■□□□□ 0
PKP4-204ENST00000421462 TBC1D3Q8IZP1 549 aaPredicted RBP15.08■□□□□ 0
PKP4-204ENST00000421462 GVQW1Q8N7I0 195 aa15.08■□□□□ 0
PKP4-204ENST00000421462 ZNF417Q8TAU3 575 aa15.08■□□□□ 0
PKP4-204ENST00000421462 CMBLQ96DG6 245 aa15.08■□□□□ 0
PKP4-204ENST00000421462 TRIM2Q9C040 744 aa15.08■□□□□ 0
PKP4-204ENST00000421462 DNAJB12Q9NXW2 375 aaKnown RBP15.08■□□□□ 0
PKP4-204ENST00000421462 SULT2B1O00204 365 aa15.07■□□□□ 0
PKP4-204ENST00000421462 SPOCK1Q08629 439 aa15.07■□□□□ 0
PKP4-204ENST00000421462 GGTLC2Q14390 218 aa15.07■□□□□ 0
PKP4-204ENST00000421462 IRF4Q15306 451 aa15.07■□□□□ 0
PKP4-204ENST00000421462 ULK3Q6PHR2 472 aa15.07■□□□□ 0
PKP4-204ENST00000421462 PARP12Q9H0J9 701 aaKnown RBP15.07■□□□□ 0
PKP4-204ENST00000421462 KCNG2Q9UJ96 466 aa15.07■□□□□ 0
PKP4-204ENST00000421462 CSAG2Q9Y5P2 127 aa15.07■□□□□ 0
PKP4-204ENST00000421462 KIF26BQ2KJY2 2108 aa15.07■□□□□ 0
PKP4-204ENST00000421462 EDDM13A0A1B0GTR0 161 aa15.07■□□□□ 0
PKP4-204ENST00000421462 CXorf51AA0A1B0GTR3 108 aa15.07■□□□□ 0
PKP4-204ENST00000421462 OR4C45A6NMZ5 311 aa15.07■□□□□ 0
PKP4-204ENST00000421462 HRKO00198 91 aa15.07■□□□□ 0
PKP4-204ENST00000421462 CTSVO60911 334 aa15.07■□□□□ 0
PKP4-204ENST00000421462 EML2O95834 649 aa15.07■□□□□ 0
PKP4-204ENST00000421462 IGKV1D-16P01601 117 aa15.07■□□□□ 0
PKP4-204ENST00000421462 RPS4Y1P22090 263 aaKnown RBP15.07■□□□□ 0
PKP4-204ENST00000421462 ACTBP60709 375 aa15.07■□□□□ 0
PKP4-204ENST00000421462 ACTG1P63261 375 aa15.07■□□□□ 0
PKP4-204ENST00000421462 ADAMTSL4Q6UY14 1074 aa15.07■□□□□ 0
PKP4-204ENST00000421462 DPY19L2P2Q6ZN68 376 aa15.07■□□□□ 0
PKP4-204ENST00000421462 SLC29A4Q7RTT9 530 aa15.07■□□□□ 0
PKP4-204ENST00000421462 PRSS35Q8N3Z0 413 aa15.07■□□□□ 0
PKP4-204ENST00000421462 C14orf79Q96F83 325 aa15.07■□□□□ 0
PKP4-204ENST00000421462 SYT4Q9H2B2 425 aa15.07■□□□□ 0
PKP4-204ENST00000421462 SERGEFQ9UGK8 458 aa15.07■□□□□ 0
PKP4-204ENST00000421462 VSIG4Q9Y279 399 aa15.07■□□□□ 0
PKP4-204ENST00000421462 SEC16AO15027 2179 aa15.07■□□□□ 0
PKP4-204ENST00000421462 PLGP00747 810 aaPredicted RBP15.06■□□□□ 0
PKP4-204ENST00000421462 INHAP05111 366 aa15.06■□□□□ 0
PKP4-204ENST00000421462 LSSP48449 732 aa15.06■□□□□ 0
PKP4-204ENST00000421462 PEA15Q15121 130 aa15.06■□□□□ 0
PKP4-204ENST00000421462 GFOD2Q3B7J2 385 aa15.06■□□□□ 0
PKP4-204ENST00000421462 FCRL6Q6DN72 434 aa15.06■□□□□ 0
PKP4-204ENST00000421462 ARMC10Q8N2F6 343 aa15.06■□□□□ 0
PKP4-204ENST00000421462 OR4A4PQ8NGN8 299 aa15.06■□□□□ 0
PKP4-204ENST00000421462 MOGAT1Q96PD6 335 aa15.06■□□□□ 0
PKP4-204ENST00000421462 MRI1Q9BV20 369 aa15.06■□□□□ 0
PKP4-204ENST00000421462 GSN-AS1Q9NRJ2 163 aa15.06■□□□□ 0
PKP4-204ENST00000421462 DUSP22Q9NRW4 184 aa15.06■□□□□ 0
PKP4-204ENST00000421462 DEC1Q9P2X7 70 aa15.06■□□□□ 0
PKP4-204ENST00000421462 F5P12259 2224 aa15.06■□□□□ 0
PKP4-204ENST00000421462 C11orf98E9PRG8 122 aa15.06■□□□□ 0
PKP4-204ENST00000421462 CSTAP01040 98 aa15.06■□□□□ 0
PKP4-204ENST00000421462 ADH1AP07327 375 aa15.06■□□□□ 0
PKP4-204ENST00000421462 KLHL26Q53HC5 615 aa15.06■□□□□ 0
PKP4-204ENST00000421462 WDR38Q5JTN6 314 aa15.06■□□□□ 0
PKP4-204ENST00000421462 FAM109BQ6ICB4 259 aaPredicted RBP15.06■□□□□ 0
PKP4-204ENST00000421462 FBXO42Q6P3S6 717 aa15.06■□□□□ 0
PKP4-204ENST00000421462 OR5AP2Q8NGF4 316 aa15.06■□□□□ 0
PKP4-204ENST00000421462 STOML3Q8TAV4 291 aa15.06■□□□□ 0
PKP4-204ENST00000421462 UQCC1Q9NVA1 299 aa15.06■□□□□ 0
PKP4-204ENST00000421462 RPH3AQ9Y2J0 694 aaPredicted RBP15.06■□□□□ 0
PKP4-204ENST00000421462 FREM3P0C091 2139 aa15.06■□□□□ 0
PKP4-204ENST00000421462 SLC31A1O15431 190 aa15.06■□□□□ 0
PKP4-204ENST00000421462 GRK6P43250 576 aa15.06■□□□□ 0
PKP4-204ENST00000421462 ELAVL1Q15717 326 aaKnown RBP15.06■□□□□ 0
PKP4-204ENST00000421462 EXOSC6Q5RKV6 272 aaKnown RBP15.06■□□□□ 0
PKP4-204ENST00000421462 GPX8Q8TED1 209 aa15.06■□□□□ 0
PKP4-204ENST00000421462 RSRP1Q9BUV0 290 aa15.06■□□□□ 0
PKP4-204ENST00000421462 SEMA6CQ9H3T2 930 aa15.06■□□□□ 0
PKP4-204ENST00000421462 LRIT1Q9P2V4 623 aa15.06■□□□□ 0
PKP4-204ENST00000421462 ARHGEF17Q96PE2 2063 aaPredicted RBP15.05■□□□□ 0
PKP4-204ENST00000421462 LOC100289279A0A1B0GTE1 492 aa15.05■□□□□ 0
PKP4-204ENST00000421462 A0A1W2PP55 124 aa15.05■□□□□ 0
PKP4-204ENST00000421462 TTLL8A6PVC2 850 aa15.05■□□□□ 0
PKP4-204ENST00000421462 H2AFB1P0C5Y9 115 aa15.05■□□□□ 0
PKP4-204ENST00000421462 ITPRIPL2Q3MIP1 535 aa15.05■□□□□ 0
PKP4-204ENST00000421462 DHRS7BQ6IAN0 325 aaPredicted RBP15.05■□□□□ 0
PKP4-204ENST00000421462 SLC16A9Q7RTY1 509 aa15.05■□□□□ 0
PKP4-204ENST00000421462 MDGA2Q7Z553 956 aa15.05■□□□□ 0
PKP4-204ENST00000421462 NAA40Q86UY6 237 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms