RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 KPNA4O00629 521 aaPredicted RBP14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 TMPRSS2O15393 492 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 ERLIN1O75477 346 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 IGHV1-46P01743 117 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 HKR1P10072 659 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 UMPSP11172 480 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 MAKP20794 623 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 CCNOP22674 350 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 GCH1P30793 250 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 IDH3AP50213 366 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 MMP15P51511 669 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 ZNF133P52736 654 aaPredicted RBP14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 MAGOHP61326 146 aaKnown RBP14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 SLC3A1Q07837 685 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 FOXL1Q12952 345 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 RUNDC3AQ59EK9 446 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 PABPC1L2AQ5JQF8 200 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 SHISA2Q6UWI4 295 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 HDDC2Q7Z4H3 204 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 NANOGNBQ7Z5D8 188 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 RBM45Q8IUH3 476 aaKnown RBP14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 C22orf15Q8WYQ4 148 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 MARS2Q96GW9 593 aaKnown RBP14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 CCDC28BQ9BUN5 200 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 KCNN2Q9H2S1 579 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 ZNF696Q9H7X3 374 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 SIAEQ9HAT2 523 aa14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 EIF3KQ9UBQ5 218 aaKnown RBP14.3□□□□□ -0.12
UPF3AP3-201ENST00000420996 PPIAL4EA0A075B759 164 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 PPIAL4CA0A0B4J2A2 164 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 A0A1W2PRG6 482 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 PLSCR5A0PG75 271 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 PPIAL4DF5H284 164 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 SPRY3O43610 288 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 UBOX5O94941 541 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 OPN1SWP03999 348 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 ADH4P08319 380 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 PPIAL4FP0DN26 164 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 ACADSP16219 412 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 STOMP27105 288 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 LCN2P80188 198 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 MRPS34P82930 218 aaKnown RBP14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 TUSC1Q2TAM9 212 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 AGKQ53H12 422 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 THEM4Q5T1C6 240 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 C10orf128Q5T292 105 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 UNQ6126/PRO20091Q6UXV3 157 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 TSPYL5Q86VY4 417 aaPredicted RBP14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 C1orf174Q8IYL3 243 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 SYT14Q8NB59 555 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 NOXO1Q8NFA2 376 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 OR4D11Q8NGI4 311 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 POM121L2Q96KW2 1035 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 C7orf26Q96N11 449 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 EGLN1Q9GZT9 426 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 PCDHAC1Q9H158 963 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 CCNB1IP1Q9NPC3 277 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 PPIAL4AQ9Y536 164 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 MEGF8Q7Z7M0 2845 aa14.29□□□□□ -0.12
UPF3AP3-201ENST00000420996 MCIDASD6RGH6 385 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 FOXH1O75593 365 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 TRMUO75648 421 aaKnown RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 F13BP05160 661 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 VIMP08670 466 aaKnown RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 LIPAP38571 399 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 MPV17P39210 176 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 WNT5AP41221 380 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 UGT2B15P54855 530 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 RPL18Q07020 188 aaKnown RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 CYP51A1Q16850 503 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 TMEM255AQ5JRV8 349 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 SPATA46Q5T0L3 261 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 MBNL2Q5VZF2 373 aaKnown RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 RBMS3Q6XE24 437 aaKnown RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 ZNF771Q7L3S4 317 aaPredicted RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 ZNF101Q8IZC7 436 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 VANGL1Q8TAA9 524 aaPredicted RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 ST7LQ8TDW4 575 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 IPCEF1Q8WWN9 437 aaPredicted RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 ASB10Q8WXI3 467 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 TLCD1Q96CP7 247 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 PRSS27Q9BQR3 290 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 EBF4Q9BQW3 602 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 MEPEQ9NQ76 525 aaPredicted RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 CYSLTR2Q9NS75 346 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 UBAP1Q9NZ09 502 aa14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 LEF1Q9UJU2 399 aaPredicted RBP14.28□□□□□ -0.12
UPF3AP3-201ENST00000420996 LOC100509620A0A075B734 347 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 ISPDA4D126 451 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 C5orf49A4QMS7 147 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 ZSCAN5BA6NJL1 495 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 ZNF32P17041 273 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 CD247P20963 164 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 GDI2P50395 445 aaKnown RBP14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 ATP4BP51164 291 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 DAP3P51398 398 aaKnown RBP14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 DOK3Q7L591 496 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 PATL1Q86TB9 770 aaKnown RBP14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 SLC30A8Q8IWU4 369 aa14.27□□□□□ -0.13
UPF3AP3-201ENST00000420996 SIGLECL1Q8N7X8 197 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms