RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GPR176Q14439 515 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 IL11RAQ14626 422 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 TRAM1Q15629 374 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 TATDN3Q17R31 274 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 RSPO4Q2I0M5 234 aaPredicted RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 TBRG1Q3YBR2 411 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 CCDC58Q4VC31 144 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 EMC4Q5J8M3 183 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 C6orf183Q5T699 404 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 LRFN4Q6PJG9 635 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 PLET1Q6UQ28 207 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 H1FNTQ75WM6 255 aaPredicted RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 ZNF248Q8NDW4 579 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 OR11G2Q8NGC1 345 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 OR6F1Q8NGZ6 308 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 ELP5Q8TE02 316 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 ACOT12Q8WYK0 555 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 ZC3H10Q96K80 434 aaKnown RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 RNF121Q9H920 327 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 BEX1Q9HBH7 125 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 B3GAT1Q9P2W7 334 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 NPIPA1Q9UND3 350 aa7.88□□□□□ -1.15
SNCA-206ENST00000420646 PPIEQ9UNP9 301 aaKnown RBP7.88□□□□□ -1.15
SNCA-206ENST00000420646 TRAV1-2A0A0B4J238 106 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 IFITM5A6NNB3 132 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 OR2T1O43869 369 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 CD53P19397 219 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 LCN1P31025 176 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 MPLP40238 635 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 CCR6P51684 374 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 GPR85P60893 370 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 TOMM20Q15388 145 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 FAAP20Q6NZ36 180 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SLC23A3Q6PIS1 610 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 UNQ9370/PRO34162Q6UXP9 181 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 NUP54Q7Z3B4 507 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 TIPARPQ7Z3E1 657 aaKnown RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 DCXRQ7Z4W1 244 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 KRT77Q7Z794 578 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 TMPRSS12Q86WS5 348 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 GLB1L2Q8IW92 636 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SLC7A5P1Q8MH63 180 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 PLPP7Q8NBV4 271 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 TRIM63Q969Q1 353 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 KCNJ15Q99712 375 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 TCF7L1Q9HCS4 588 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SERINC1Q9NRX5 453 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 RBFOX1Q9NWB1 397 aaKnown RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 MRPL39Q9NYK5 338 aaKnown RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 EMC9Q9Y3B6 208 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 ZNF318Q5VUA4 2279 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 A0A0G2JMM0 328 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 A0A1W2PPB8 328 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 A0A1W2PRS3 328 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 LIPT2A6NK58 231 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 KIR3DP1A8MWS1 328 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SMLR1H3BR10 107 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 RCVRNP35243 200 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SF3A2Q15428 464 aaKnown RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 Q499Y3 187 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 YIF1BQ5BJH7 314 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 ATAD3CQ5T2N8 411 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 ASPHD2Q6ICH7 369 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SCAIQ8N9R8 606 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 DTWD2Q8NBA8 298 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 STK35Q8TDR2 534 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 TSEN15Q8WW01 171 aaKnown RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 ASB10Q8WXI3 467 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 ST8SIA1Q92185 356 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 RFT1Q96AA3 541 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SLC25A38Q96DW6 304 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 FRMD6Q96NE9 622 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SEC61A2Q9H9S3 476 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 DDX28Q9NUL7 540 aaKnown RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 KLK11Q9UBX7 282 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 LRP12Q9Y561 859 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 FKBP7Q9Y680 259 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 EXPH5Q8NEV8 1989 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SEC14L5O43304 696 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 LDOC1O95751 146 aaPredicted RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 SYPP08247 313 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 CFL1P23528 166 aaKnown RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 APOBEC1P41238 236 aaKnown RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 GLO1Q04760 184 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SLC17A1Q14916 467 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 NTRK2Q16620 822 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SLC36A2Q495M3 483 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 TEX19Q8NA77 164 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 OR2M3Q8NG83 312 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 OR4K17Q8NGC6 315 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 DDIT4LQ96D03 193 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 ST6GAL2Q96JF0 529 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 IMMP1LQ96LU5 166 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 OR8B4Q96RC9 309 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 SLC26A1Q9H2B4 701 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 EMC7Q9NPA0 242 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 C19orf25Q9UFG5 118 aaPredicted RBP7.87□□□□□ -1.15
SNCA-206ENST00000420646 PISDQ9UG56 409 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 OR5V1Q9UGF6 321 aa7.87□□□□□ -1.15
SNCA-206ENST00000420646 ADAM30Q9UKF2 790 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms