RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ZNF32P17041 273 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 SCGB2A2Q13296 93 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 HFEQ30201 348 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 PCGF3Q3KNV8 242 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 ENTPD8Q5MY95 495 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 TMEM53Q6P2H8 277 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 NOXO1Q8NFA2 376 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 PFN4Q8NHR9 129 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 SLC25A40Q8TBP6 338 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 NABP1Q96AH0 204 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 MARS2Q96GW9 593 aaKnown RBP10.88□□□□□ -0.67
LINC00339-203ENST00000420503 SLC25A44Q96H78 314 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-203ENST00000420503 DCLRE1CQ96SD1 692 aaKnown RBP10.88□□□□□ -0.67
LINC00339-203ENST00000420503 OR2J1Q9GZK6 312 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF696Q9H7X3 374 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 MSL2Q9HCI7 577 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 MEPEQ9NQ76 525 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-203ENST00000420503 DDX28Q9NUL7 540 aaKnown RBP10.88□□□□□ -0.67
LINC00339-203ENST00000420503 SLCO1C1Q9NYB5 712 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 CCDC167Q9P0B6 97 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 SLC7A7Q9UM01 511 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 USH1CQ9Y6N9 552 aa10.88□□□□□ -0.67
LINC00339-203ENST00000420503 VWFP04275 2813 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 CHP2O43745 196 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 TRMUO75648 421 aaKnown RBP10.87□□□□□ -0.67
LINC00339-203ENST00000420503 OR6A2O95222 327 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 ASAH2BP0C7U1 165 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 FUT1P19526 365 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 DRD4P21917 467 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 FUT4P22083 530 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 OMGP23515 440 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 CRYBA2P53672 197 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 PCBP3P57721 371 aaKnown RBP10.87□□□□□ -0.67
LINC00339-203ENST00000420503 CLRN1P58418 232 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 ERVK-25P63136 954 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 RPL18Q07020 188 aaKnown RBP10.87□□□□□ -0.67
LINC00339-203ENST00000420503 HIST3H3Q16695 136 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 EPGNQ6UW88 154 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 SHISA2Q6UWI4 295 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 TREML4Q6UXN2 200 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 RANBP3LQ86VV4 465 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-203ENST00000420503 SNX32Q86XE0 403 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 KRT73Q86Y46 540 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 MOSPD2Q8NHP6 518 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 ADAMTS16Q8TE57 1224 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 NSMAFQ92636 917 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 NMD3Q96D46 503 aaKnown RBP10.87□□□□□ -0.67
LINC00339-203ENST00000420503 SPDL1Q96EA4 605 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 ELMOD3Q96FG2 381 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 POM121L2Q96KW2 1035 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 PRSS27Q9BQR3 290 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 MRPL13Q9BYD1 178 aaKnown RBP10.87□□□□□ -0.67
LINC00339-203ENST00000420503 TMEM38AQ9H6F2 299 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-203ENST00000420503 FBXL3Q9UKT7 428 aa10.87□□□□□ -0.67
LINC00339-203ENST00000420503 SLC22A23A1A5C7 686 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 C5orf49A4QMS7 147 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 BLOC1S5-TXNDC5H3BN57 136 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 ATP8B1O43520 1251 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SHOX2O60902 331 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-203ENST00000420503 FARS2O95363 451 aaKnown RBP10.86□□□□□ -0.67
LINC00339-203ENST00000420503 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 IGHG1P01857 330 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SBK2P0C263 348 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 UMPSP11172 480 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 GPX2P18283 190 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 TNFRSF1BP20333 461 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 CD247P20963 164 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 MDKP21741 143 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SLC6A2P23975 617 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 PRTN3P24158 256 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 STOMP27105 288 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 AQP2P41181 271 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 ERFP50548 548 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 UGT2B15P54855 530 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 MTPNP58546 118 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SELENOVP59797 346 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 HSF2Q03933 536 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 MIDNQ504T8 468 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 OTPQ5XKR4 325 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 LEG1Q6P5S2 330 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF613Q6PF04 617 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 DLEU7Q6UYE1 221 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 DOK3Q7L591 496 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 HIPK4Q8NE63 616 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 ABHD4Q8TB40 342 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 KLF14Q8TD94 323 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-203ENST00000420503 ASB10Q8WXI3 467 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 HDAC2Q92769 488 aaKnown RBP10.86□□□□□ -0.67
LINC00339-203ENST00000420503 RAB1CQ92928 201 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 TAMM41Q96BW9 452 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 TIMD4Q96H15 378 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SEPHS2Q99611 448 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 ZNF426Q9BUY5 554 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SPATA5L1Q9BVQ7 753 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 BCL2L14Q9BZR8 327 aa10.86□□□□□ -0.67
LINC00339-203ENST00000420503 SLCO1B3Q9NPD5 702 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms