RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 NDUFAF6Q330K2 333 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 LINC00303Q3SY05 128 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 EIPR1Q53HC9 387 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 C3orf33Q6P1S2 294 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 RPL22L1Q6P5R6 122 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 FAM199XQ6PEV8 388 aaPredicted RBP13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 TMEM99Q8N816 258 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 AGBL5Q8NDL9 886 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 C7orf57Q8NEG2 295 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 C16orf52Q8NHV5 167 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 LGALS14Q8TCE9 139 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 GLYATL2Q8WU03 294 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 LMF2Q9BU23 707 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 FXYD6Q9H0Q3 95 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 CMC2Q9NRP2 79 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 FBXO34Q9NWN3 711 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 ST6GALNAC2Q9UJ37 374 aa13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 MRTO4Q9UKD2 239 aaKnown RBP13.4□□□□□ -0.26
SEMA4D-204ENST00000420101 TMEM218A2RU14 115 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 NTN3O00634 580 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 DBIP07108 87 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 HEXBP07686 556 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 FOLR2P14207 255 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 PAX6P26367 422 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 HTR2AP28223 471 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 GALNSP34059 522 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 PSG6Q00889 435 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 SRSF4Q08170 494 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 FUT7Q11130 342 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 TRA2AQ13595 282 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 NKAIN1Q4KMZ8 207 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 RNASE12Q5GAN4 147 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 AVPI1Q5T686 147 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 FAM27D1Q5T7N8 215 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 PLBD1Q6P4A8 553 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 ZNF704Q6ZNC4 412 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 PRSS45Q7RTY3 260 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 KCNRGQ8N5I3 272 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 OR4N2Q8NGD1 307 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 SFT2D1Q8WV19 159 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 CCDC107Q8WV48 283 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 C4orf36Q96KX1 117 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 TEAD3Q99594 435 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 GINS4Q9BRT9 223 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 VN1R1Q9GZP7 353 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 UPB1Q9UBR1 384 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 DTX4Q9Y2E6 619 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 KANTRA0A1W2PQU2 76 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 OR14I1A6ND48 311 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 UNC119BA6NIH7 251 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 ACOD1A6NK06 481 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 CPSF4LA6NMK7 179 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 PEX12O00623 359 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 CD8AP01732 235 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 CSF1P09603 554 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 MST1P26927 711 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 CDK5R1Q15078 307 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 PAN3Q58A45 887 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 PLA2G2CQ5R387 149 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 ZNF836Q6ZNA1 936 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 ZNF600Q6ZNG1 722 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 SLC38A9Q8NBW4 561 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 OR6N1Q8NGY5 312 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 STT3BQ8TCJ2 826 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 PTPMT1Q8WUK0 201 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 DAZLQ92904 295 aaKnown RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 KISS1RQ969F8 398 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 HAVCR1Q96D42 359 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 SAMD8Q96LT4 415 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 VSTM2LQ96N03 204 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 ENKD1Q9H0I2 346 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 MYOZ1Q9NP98 299 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 ZFP57Q9NU63 452 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 ZMIZ1Q9ULJ6 1067 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 SLC35A3Q9Y2D2 325 aa13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 GPR55Q9Y2T6 319 aaPredicted RBP13.39□□□□□ -0.27
SEMA4D-204ENST00000420101 IFITM5A6NNB3 132 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 J3QLW9 94 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 BHLHE40O14503 412 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 BRINP1O60477 761 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 RLN2P04090 185 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 ZGLP1P0C6A0 271 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 SLC25A4P12235 298 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 ZNF19P17023 458 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 ACP1P24666 158 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 TRHRP34981 398 aaPredicted RBP13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 IGSF11Q5DX21 431 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 EXOSC6Q5RKV6 272 aaKnown RBP13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 HLA-DQA1Q5Y7H0 255 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 DBX2Q6ZNG2 339 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 NRMQ8IXM6 262 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 SLC41A3Q96GZ6 507 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 ART5Q96L15 291 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 GAL3ST4Q96RP7 486 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 MCHR1Q99705 422 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 G6PC3Q9BUM1 346 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 POLE3Q9NRF9 147 aa13.38□□□□□ -0.27
SEMA4D-204ENST00000420101 SIDT1Q9NXL6 827 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms