RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 DPYSL5Q9BPU6 564 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 PDCD10Q9BUL8 212 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 FBXO4Q9UKT5 387 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 OR6C65A6NJZ3 312 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF264O43296 627 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 HCRTR2O43614 444 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF432O94892 652 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 AKT2P31751 481 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 DEFA5Q01523 94 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 BAMBIQ13145 260 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 ELP2Q6IA86 826 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 OR10K2Q6IF99 312 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 TMEM205Q6UW68 189 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 BEST3Q8N1M1 668 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 BVESQ8NE79 360 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 OR1S1Q8NH92 325 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 METTL21AQ8WXB1 218 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 ELSPBP1Q96BH3 223 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 PTDSS2Q9BVG9 487 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 SHARPINQ9H0F6 387 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 TMEM14AQ9Y6G1 99 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 FREM3P0C091 2139 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 TRBV5-7A0A0A0MS05 114 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 C17orf105B2RV13 164 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 SRPX2O60687 465 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 PLATP00750 562 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 HOXC4P09017 264 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 MST1P26927 711 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 NKPD1Q17RQ9 610 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 NDUFAF7Q7L592 441 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 CDH26Q8IXH8 852 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF440Q8IYI8 595 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 GABRG1Q8N1C3 465 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 C19orf47Q8N9M1 422 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 LRRC75AQ8NAA5 344 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 GABRG3Q99928 467 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 TINAGL1Q9GZM7 467 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 NRSN2Q9GZP1 204 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 TMEM185BQ9H7F4 350 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 TNFRSF10CO14798 259 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 LINC01565O15544 149 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 ASAH2BP0C7U1 165 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 TPMTP51580 245 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 MECP2P51608 486 aaKnown RBP13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 GLYATL3Q5SZD4 288 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 MDGA2Q7Z553 956 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 C12orf45Q8N5I9 185 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 FBXW5Q969U6 566 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 SEC22AQ96IW7 307 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 SEMA6CQ9H3T2 930 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 KIF26BQ2KJY2 2108 aa13.71□□□□□ -0.21
SEMA3B-203ENST00000419007 LOC100289279A0A1B0GTE1 492 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 A0A1B0GTQ1 180 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 TMEM82A0PJX8 343 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 A8MXK9 166 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 CCSO14618 274 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC16A7O60669 478 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 OR4E1P0C645 316 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 CTRB1P17538 263 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 CXCR1P25024 350 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 STARP49675 285 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 CTRB2Q6GPI1 263 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 FAM122CQ6P4D5 195 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 JAGN1Q8N5M9 183 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 OR5M9Q8NGP3 310 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 CMKLR1Q99788 373 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 NXF5Q9H1B4 397 aaKnown RBP13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 DHDHQ9UQ10 334 aa13.71□□□□□ -0.22
SEMA3B-203ENST00000419007 FAM25EA8MYX2 175 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 D6RAR5 112 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 BET1O15155 118 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 TMEM127O75204 238 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 UTS2O95399 124 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 WNT11O96014 354 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 PNPP00491 289 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF28P17035 718 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 UBE2IP63279 158 aaKnown RBP13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 SKP2Q13309 424 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 TAF13Q15543 124 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 ETFDHQ16134 617 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 LIN54Q6MZP7 749 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 GALNT16Q8N428 558 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 STEAP2Q8NFT2 490 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 OR1J4Q8NGS1 313 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 MAP3K3Q99759 626 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 MSRAQ9UJ68 235 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 EGR3Q06889 387 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 TOMM34Q15785 309 aaPredicted RBP13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 EEF1A1P5Q5VTE0 462 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 ATRAIDQ6UW56 229 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 TMEM184AQ6ZMB5 413 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 OVCH2Q7RTZ1 564 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 NAXDQ8IW45 347 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC22A18ASQ8N1D0 253 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 CLEC1AQ8NC01 280 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 OR10K1Q8NGX5 313 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 OTOSQ8NHW6 89 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 MCHR2Q969V1 340 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 B3GNT4Q9C0J1 378 aa13.7□□□□□ -0.22
SEMA3B-203ENST00000419007 EXOSC3Q9NQT5 275 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms