RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CGAP01215 116 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TRBC1P01850 177 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 HLA-DPB1P04440 258 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 IFNW1P05000 195 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DUX4L2P0CJ85 424 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DUX4L3P0CJ86 424 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DUX4L4P0CJ87 422 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DUX4L5P0CJ88 424 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DUX4L6P0CJ89 424 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DUX4L7P0CJ90 424 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ANXA3P12429 323 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 HLA-EP13747 358 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DPEP1P16444 411 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 RPL35AP18077 110 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 TNNI3P19429 210 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 MAGP20916 626 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 GSTM3P21266 225 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 F8A1P23610 371 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ELAVL4P26378 380 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 STOMP27105 288 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 RBMS1P29558 406 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 CCND3P30281 292 aaPredicted RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 HMGCLP35914 325 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 MMP12P39900 470 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CDKN2CP42773 168 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CRYBB2P43320 205 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 XCR1P46094 333 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 STK19P49842 368 aaPredicted RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 ETV1P50549 477 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ACLYP53396 1101 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 WNT4P56705 351 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 AP1S1P61966 158 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 HMGCS1Q01581 520 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 BDH1Q02338 343 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 RAB40BQ12829 278 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 COX10Q12887 443 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PPP1R8Q12972 351 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 TPBGQ13641 420 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 HEPACAMQ14CZ8 416 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PTGES3Q15185 160 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 RGNQ15493 299 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TRAM1Q15629 374 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SSX1Q16384 188 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 EXOC3L2Q2M3D2 409 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 WSCD2Q2TBF2 565 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SLC39A12Q504Y0 691 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 LBHQ53QV2 105 aaPredicted RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 SPOUT1Q5T280 376 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 GPRC6AQ5T6X5 926 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CPTPQ5TA50 214 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 C12orf73Q69YU5 71 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 FRMPD2BQ6IN97 320 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 FBXL22Q6P050 247 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TRIM40Q6P9F5 258 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 CD200R1LQ6Q8B3 271 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TEX261Q6UWH6 196 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TMEM107Q6UX40 140 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 BAIAP2L2Q6UXY1 529 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ZNF730Q6ZMV8 503 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ZNF621Q6ZSS3 439 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SLC24A5Q71RS6 500 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 FCRLAQ7L513 359 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 VTCN1Q7Z7D3 282 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SCD5Q86SK9 330 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 LAX1Q8IWV1 398 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 BBS7Q8IWZ6 715 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PHC2Q8IXK0 858 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 KLHDC8AQ8IYD2 350 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PIANPQ8IYJ0 282 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SLC38A6Q8IZM9 456 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SLC34A3Q8N130 599 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 Q8N402 240 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 KRTCAP2Q8N6L1 136 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 LRTM2Q8N967 370 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TRPV1Q8NER1 839 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 OR7G3Q8NG95 312 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 OR8H1Q8NGG4 311 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 OCC1Q8TAD7 63 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SPPL2AQ8TCT8 520 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ZNF431Q8TF32 576 aaPredicted RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 C2orf15Q8WU43 125 aaKnown RBP2.27□□□□□ -2.05
VPS41-206ENST00000418457 GATAD1Q8WUU5 269 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PIH1D2Q8WWB5 315 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 DNAJB3Q8WWF6 145 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 UFD1Q92890 307 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 HGDQ93099 445 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 ST6GALNAC6Q969X2 333 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PPP1R16AQ96I34 528 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TPD52L3Q96J77 140 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 POM121L2Q96KW2 1035 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 LINC00479Q96M42 142 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TSSK3Q96PN8 268 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 OR2M2Q96R28 347 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 OR5M11Q96RB7 305 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 C17orf62Q9BQA9 187 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 SOSTQ9BQB4 213 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 PIGQQ9BRB3 760 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 TMEM43Q9BTV4 400 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 UCK2Q9BZX2 261 aa2.27□□□□□ -2.05
VPS41-206ENST00000418457 POLR2J2Q9GZM3 115 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms