RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 E2F6O75461 281 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 CBR3O75828 277 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 GADD45GO95257 159 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 LYPD3O95274 346 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 THY1P04216 161 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 H1F0P07305 194 aaKnown RBP5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 THRBP10828 461 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 PSG1P11464 419 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 GP1BBP13224 206 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ELAVL4P26378 380 aaKnown RBP5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 DPP4P27487 766 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 RRM2P31350 389 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 PSMB10P40306 273 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ZNF41P51814 821 aaPredicted RBP5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 DLX5P56178 289 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 SLC34A1Q06495 639 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ST3GAL3Q11203 375 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 DGCR6Q14129 220 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 GK3PQ14409 553 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 TRAM2Q15035 370 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 QPRTQ15274 297 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 TOMM20Q15388 145 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 EXOC3L2Q2M3D2 409 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 LINC00303Q3SY05 128 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 HIST2H2BCQ6DN03 193 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 HIST2H2BDQ6DRA6 164 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ULK3Q6PHR2 472 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ARSKQ6UWY0 536 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 GALNTL5Q7Z4T8 443 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 OFCC1Q8IZS5 231 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 CADM2Q8N3J6 435 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 TMEM178AQ8NBL3 297 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 OR4C15Q8NGM1 316 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 OR52J3Q8NH60 311 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 OR5K1Q8NHB7 308 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ZNF563Q8TA94 476 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 DNAJA4Q8WW22 397 aaPredicted RBP5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 TMEM234Q8WY98 164 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ST8SIA1Q92185 356 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 SLC38A4Q969I6 547 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ERGIC1Q969X5 290 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ZNF524Q96C55 264 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 DTNBP1Q96EV8 351 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 SLC41A3Q96GZ6 507 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ZNF597Q96LX8 424 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 EPYCQ99645 322 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 FAM110AQ9BQ89 295 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 C1QTNF5Q9BXJ0 243 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ANKRD19PQ9H560 264 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 PRORYQ9H606 182 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 REEP1Q9H902 201 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 RANGRFQ9HD47 186 aaPredicted RBP5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 MAN2C1Q9NTJ4 1040 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 MED17Q9NVC6 651 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 VNN3Q9NY84 501 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 SELENONQ9NZV5 590 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 FBXL2Q9UKC9 423 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 TMCC3Q9ULS5 477 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 SLC7A7Q9UM01 511 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 BOKQ9UMX3 212 aaPredicted RBP5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 C15orf41Q9Y2V0 281 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 SAMHD1Q9Y3Z3 626 aaKnown RBP5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 CSAG2Q9Y5P2 127 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 U3KQV3 271 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 ANKRD11Q6UB99 2663 aaPredicted RBP5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 CPAMD8Q8IZJ3 1885 aa5.22□□□□□ -1.57
NIFKP3-201ENST00000417799 CACNA1GO43497 2377 aa5.21□□□□□ -1.57
NIFKP3-201ENST00000417799 A0A087WUJ7 227 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 TMED7-TICAM2A0A0A6YYA0 188 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 TRBV4-1A0A0J9YWV2 114 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 hCG_1807616A0A1W2PRN6 198 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 SH3PXD2BA1X283 911 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 FAM90A8PA6NJQ4 464 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 A8MZ25 164 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 K7EM74 188 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 CASQ2O14958 399 aaPredicted RBP5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 CHP2O43745 196 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 ZIC3O60481 467 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 TSPAN9O75954 239 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 GLSO94925 669 aaPredicted RBP5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 CCNB2O95067 398 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 OR2C1O95371 312 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 NTN1O95631 604 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 LCATP04180 440 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 FAM90A13PP0C7W8 464 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 FAM90A24PP0C7X0 464 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 PNMTP11086 282 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 ZNF23P17027 643 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 CXCR1P25024 350 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 SRD5A2P31213 254 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 GCKP35557 465 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 APOBEC1P41238 236 aaKnown RBP5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 EIF1P41567 113 aaKnown RBP5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 NR4A2P43354 598 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 POLR2HP52434 150 aaKnown RBP5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 ARHGDIAP52565 204 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 IST1P53990 364 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 DSCR4P56555 118 aaPredicted RBP5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 PLGLB1Q02325 96 aa5.21□□□□□ -1.58
NIFKP3-201ENST00000417799 MERTKQ12866 999 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms