RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ZNF354BQ96LW1 612 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 ERMAPQ96PL5 475 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 PAFAH2Q99487 392 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 TEAD3Q99594 435 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 EBF4Q9BQW3 602 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 SYT11Q9BT88 431 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 NDUFAF3Q9BU61 184 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 MRPL13Q9BYD1 178 aaKnown RBP4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 POTEKPQ9BYX7 375 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 RIBC2Q9H4K1 309 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 WDR41Q9HAD4 459 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 POPDC2Q9HBU9 364 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 SIRT7Q9NRC8 400 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 CISHQ9NSE2 258 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 ING1Q9UK53 422 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 CARHSP1Q9Y2V2 147 aaKnown RBP4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 PCYT1BQ9Y5K3 369 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 NPTNQ9Y639 398 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 TENM1Q9UKZ4 2725 aa4.9□□□□□ -1.63
ECHDC1-206ENST00000417628 CR1P17927 2039 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TRGV11A0A075B6L2 103 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 A0A0J9YYE9 177 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 FAM74A7A6NL05 159 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 EFCAB9A8MZ26 197 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 C1orf196B1AJZ1 125 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 E9PI62 339 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 H7C417 338 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 K7EP13 123 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 M0R233 179 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 PDCD5O14737 125 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 CHST10O43529 356 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 LMX1BO60663 402 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 AQP8O94778 261 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 LGI1O95970 557 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 SOD1P00441 154 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TRBC1P01850 177 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 SERPINE1P05121 402 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 SPP1P10451 314 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 PEPDP12955 493 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 NR2C1P13056 603 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 DTYMKP23919 212 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 G0S2P27469 103 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 AKT1P31749 480 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 ACVRL1P37023 503 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TGFBR2P37173 567 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 LIPAP38571 399 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 PTGFRP43088 359 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 MAGEA2P43356 314 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 RAB28P51157 221 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 XKP51811 444 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 GMFBP60983 142 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 GK2Q14410 553 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 OR1C1Q15619 314 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 CHI3L2Q15782 390 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TBCEQ15813 527 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TMEM249Q2WGJ8 235 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 VPS26BQ4G0F5 336 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 FAM74A3Q4VXF1 159 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TFDP3Q5H9I0 405 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 COQ5Q5HYK3 327 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 C9orf152Q5JTZ5 239 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 C6orf141Q5SZD1 244 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 FAM120AOSQ5T036 256 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 C8orf82Q6P1X6 216 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TIFABQ6ZNK6 161 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF571Q7Z3V5 609 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 DTX2Q86UW9 622 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 OOSP2Q86WS3 158 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 RNF130Q86XS8 419 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 TGIF2LXQ8IUE1 241 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF683Q8IZ20 524 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 PRSS35Q8N3Z0 413 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 MS4A15Q8N5U1 240 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF283Q8N7M2 679 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 L3MBTL4Q8NA19 623 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 RELL2Q8NC24 303 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 C19orf18Q8NEA5 215 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 OR2T11Q8NH01 316 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 OR5R1Q8NH85 324 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 OR2V1Q8NHB1 315 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF671Q8TAW3 534 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC35F5Q8WV83 523 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 LIPHQ8WWY8 451 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 KAT2AQ92830 837 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 OSTF1Q92882 214 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 SLCO4A1Q96BD0 722 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 CCDC126Q96EE4 140 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 SENP5Q96HI0 755 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 CELF6Q96J87 481 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF747Q9BV97 191 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 ACTRT3Q9BYD9 372 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 OR52A5Q9H2C5 316 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 PRDM13Q9H4Q3 707 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 DUSP21Q9H596 190 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 RBFOX1Q9NWB1 397 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 RAB20Q9NX57 234 aa4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 NXT1Q9UKK6 140 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 ZNF490Q9ULM2 529 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-206ENST00000417628 CNTN6Q9UQ52 1028 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms