RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 BGLAPP02818 100 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 RORAP35398 523 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 RAP2BP61225 183 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 INSM1Q01101 510 aaPredicted RBP13.06□□□□□ -0.32
HDAC9-208ENST00000417496 BIKQ13323 160 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 SERTAD2Q14140 314 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 DEFB133Q30KQ1 61 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.06□□□□□ -0.32
HDAC9-208ENST00000417496 PXDC1Q5TGL8 231 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 OR10K2Q6IF99 312 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 DNM1P46Q6ZS02 220 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 CGGBP1Q9UFW8 167 aaPredicted RBP13.06□□□□□ -0.32
HDAC9-208ENST00000417496 OPN4Q9UHM6 478 aa13.06□□□□□ -0.32
HDAC9-208ENST00000417496 A0A1B0GTQ1 180 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 A0A1W2PPC4 97 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 C2orf72A6NCS6 295 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 B8ZZF3 427 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 DDAH2O95865 285 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 ACSM4P0C7M7 580 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 HLA-DOBP13765 273 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 RASGEF1BQ0VAM2 473 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 SLC17A1Q14916 467 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 EMC4Q5J8M3 183 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
HDAC9-208ENST00000417496 SHISA6Q6ZSJ9 500 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 C9orf40Q8IXQ3 194 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 OR51A2Q8NGJ7 313 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 STK35Q8TDR2 534 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF721Q8TF20 911 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 RBPMSQ93062 196 aaKnown RBP13.05□□□□□ -0.32
HDAC9-208ENST00000417496 MARVELD3Q96A59 401 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 UTP23Q9BRU9 249 aaKnown RBP13.05□□□□□ -0.32
HDAC9-208ENST00000417496 PDE7BQ9NP56 450 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 THADAQ6YHU6 1953 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 FREM3P0C091 2139 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 TMEM272A0A1B0GTI8 110 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 DCDC2BA2VCK2 349 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 SNRPGP15A8MWD9 76 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 CDC40O60508 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC9-208ENST00000417496 OR6A2O95222 327 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 IL5P05113 134 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 IL11P20809 199 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 IL12BP29460 328 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 BLKP51451 505 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 SEC61A1P61619 476 aaKnown RBP13.05□□□□□ -0.32
HDAC9-208ENST00000417496 ADAM8P78325 824 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 HLXQ14774 488 aaPredicted RBP13.05□□□□□ -0.32
HDAC9-208ENST00000417496 C4orf46Q504U0 113 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 OR1J4Q8NGS1 313 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 WBP1Q96G27 269 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 SLC46A1Q96NT5 459 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 OR8B4Q96RC9 309 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 NPAS1Q99742 590 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 MESP1Q9BRJ9 268 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 PTDSS2Q9BVG9 487 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 ARL6Q9H0F7 186 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 EXOSC3Q9NQT5 275 aaKnown RBP13.05□□□□□ -0.32
HDAC9-208ENST00000417496 TMEM14AQ9Y6G1 99 aa13.05□□□□□ -0.32
HDAC9-208ENST00000417496 VPS13AQ96RL7 3174 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 COL4A2P08572 1712 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 PRSS37A4D1T9 235 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 C10orf142B7Z368 130 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 M0QYG6 137 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 SLC25A12O75746 678 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 IGKV3-11P04433 115 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 LTBRP36941 435 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 MNDAP41218 407 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 GLYATL3Q5SZD4 288 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF627Q7L945 461 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 TNFAIP8L1Q8WVP5 186 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF285Q96NJ3 590 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 DMRTA2Q96SC8 542 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 LAT2Q9GZY6 243 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 CUTCQ9NTM9 273 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 UBE2QL1A1L167 161 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 TMEM150CB9EJG8 249 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 LMX1BO60663 402 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 PRSS3P35030 304 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 MECP2P51608 486 aaKnown RBP13.04□□□□□ -0.32
HDAC9-208ENST00000417496 MAP2K6P52564 334 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 EPHA4P54764 986 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 NSDHLQ15738 373 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 RAB11BQ15907 218 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 B3GNTL1Q67FW5 361 aaPredicted RBP13.04□□□□□ -0.32
HDAC9-208ENST00000417496 KRT77Q7Z794 578 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 TMED4Q7Z7H5 227 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 ZNF679Q8IYX0 411 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 GPR119Q8TDV5 335 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 DUSP19Q8WTR2 217 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 LINC00052Q96N35 136 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 TBL1XR1Q9BZK7 514 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 EXO5Q9H790 373 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 GPR27Q9NS67 375 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 TAS2R4Q9NYW5 299 aa13.04□□□□□ -0.32
HDAC9-208ENST00000417496 MRPS18BQ9Y676 258 aaKnown RBP13.04□□□□□ -0.32
HDAC9-208ENST00000417496 BLACEA4D250 179 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 FRG2CA6NGY1 282 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 LGALS8O00214 317 aa13.03□□□□□ -0.32
HDAC9-208ENST00000417496 TPD52L2O43399 206 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms