RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 RNF14Q9UBS8 474 aa3.98□□□□□ -1.77
CSTF1-202ENST00000415828 SEC14L4Q9UDX3 406 aa3.98□□□□□ -1.77
CSTF1-202ENST00000415828 GAGE2DQ9UEU5 116 aa3.98□□□□□ -1.77
CSTF1-202ENST00000415828 UTP11Q9Y3A2 253 aaKnown RBP3.98□□□□□ -1.77
CSTF1-202ENST00000415828 CLCA3PQ9Y6N3 262 aa3.98□□□□□ -1.77
CSTF1-202ENST00000415828 FAT1Q14517 4588 aa3.98□□□□□ -1.77
CSTF1-202ENST00000415828 SH3PXD2BA1X283 911 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 SMIM23A6NLE4 172 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 OR6C76A6NM76 312 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 HACD1B0YJ81 288 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 ZNF487B1APH4 448 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 STX7O15400 261 aaKnown RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 SNX4O95219 450 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 C1orf105O95561 183 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 LHBP01229 141 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 IFNA16P05015 189 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 MELTFP08582 738 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 PRB4P10163 310 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 ACP2P11117 423 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 CCNCP24863 283 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 CCR7P32248 378 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 RPA3P35244 121 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 PRDX1Q06830 199 aaKnown RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 HSPA14Q0VDF9 509 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 PDIA2Q13087 525 aaKnown RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 KCNJ11Q14654 390 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 GANABQ14697 944 aaKnown RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 TEX44Q53QW1 395 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 PPP1R21Q6ZMI0 780 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 DGAT2L6Q6ZPD8 337 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 IFT20Q8IY31 132 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 PRR22Q8IZ63 422 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 OR8H3Q8N146 312 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 CA13Q8N1Q1 262 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 RIBC1Q8N443 379 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 NAT8LQ8N9F0 302 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 L3MBTL4Q8NA19 623 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 MORN4Q8NDC4 146 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 OR2T12Q8NG77 320 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 OR5L2Q8NGL0 311 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 WDR20Q8TBZ3 569 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 FBXO25Q8TCJ0 367 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 GRK7Q8WTQ7 553 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 LRRC45Q96CN5 670 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 ISOC1Q96CN7 298 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 MUCL1Q96DR8 90 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 MTERF3Q96E29 417 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 SNF8Q96H20 258 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 SENP5Q96HI0 755 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 GMPPAQ96IJ6 420 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 TSGA13Q96PP4 275 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 RAB3IPQ96QF0 476 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 TBL1YQ9BQ87 522 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 BARHL1Q9BZE3 327 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 PELI2Q9HAT8 420 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 HHATLQ9HCP6 504 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 ZNF275Q9NSD4 429 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 ZDHHC18Q9NUE0 388 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 ADPRHL2Q9NX46 363 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 PAK5Q9P286 719 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 SLC2A6Q9UGQ3 507 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 CHMP2BQ9UQN3 213 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 ZNF337Q9Y3M9 751 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 ZNF175Q9Y473 711 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 SPIN1Q9Y657 262 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 SLC22A7Q9Y694 548 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 MAD1L1Q9Y6D9 718 aa3.97□□□□□ -1.77
CSTF1-202ENST00000415828 NUP214P35658 2090 aaPredicted RBP3.97□□□□□ -1.77
CSTF1-202ENST00000415828 KCNE1BA0A087WTH5 132 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 PRSS51A0A1B0GVH4 220 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 OR51F1A6NGY5 319 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 C17orf105B2RV13 164 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 GOLGA8KD6RF30 607 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 TRAPPC2LH3BP13 241 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 GOLGA8TH3BQL2 631 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 PPIHO43447 177 aaKnown RBP3.96□□□□□ -1.78
CSTF1-202ENST00000415828 IGHV2-5P01817 119 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 SHBGP04278 402 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 IFNW1P05000 195 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 OR4A8P0C604 315 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 RNH1P13489 461 aaKnown RBP3.96□□□□□ -1.78
CSTF1-202ENST00000415828 ANPEPP15144 967 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 TIA1P31483 386 aaKnown RBP eCLIP3.96□□□□□ -1.78
CSTF1-202ENST00000415828 FDFT1P37268 417 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 ELK3P41970 407 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 RFX3P48380 749 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 ATP4BP51164 291 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 RAB8AP61006 207 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 RELAQ04206 551 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 CALCOCO2Q13137 446 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 PRPSAP1Q14558 356 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 POU6F1Q14863 301 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 HERC3Q15034 1050 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 UAP1Q16222 522 aaPredicted RBP3.96□□□□□ -1.78
CSTF1-202ENST00000415828 BCL2A1Q16548 175 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 PARP6Q2NL67 630 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 TIMM23BQ5SRD1 257 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 ARMC4Q5T2S8 1044 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 OR5M10Q6IEU7 315 aa3.96□□□□□ -1.78
CSTF1-202ENST00000415828 CASC4Q6P4E1 433 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms