RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 PTGS2P35354 604 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 PTGDSP41222 190 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 KIR2DL3P43628 341 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 CAPZA1P52907 286 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 CLDN20P56880 219 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 ADAM8P78325 824 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 HSF1Q00613 529 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 DYRK1AQ13627 763 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 OR7A5Q15622 319 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 BTBD16Q32M84 506 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 THEM4Q5T1C6 240 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 SLC22A10Q63ZE4 541 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 RHOUQ7L0Q8 258 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 OR2M3Q8NG83 312 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 OR13C5Q8NGS8 318 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 MR1Q95460 341 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 TRIM63Q969Q1 353 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 S100A16Q96FQ6 103 aaKnown RBP12.19□□□□□ -0.46
LIMS1-205ENST00000410093 IMMP1LQ96LU5 166 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 RBP7Q96R05 134 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 TTTY10Q9BZA0 68 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 FAM117AQ9C073 453 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 OR11A1Q9GZK7 315 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 TSPAN10Q9H1Z9 355 aaPredicted RBP12.19□□□□□ -0.46
LIMS1-205ENST00000410093 B3GAT2Q9NPZ5 323 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 KLHDC2Q9Y2U9 406 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 AK6Q9Y3D8 172 aaKnown RBP12.19□□□□□ -0.46
LIMS1-205ENST00000410093 PCDHGA9Q9Y5G4 932 aaKnown RBP12.19□□□□□ -0.46
LIMS1-205ENST00000410093 H7C1C5 153 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 PIN1P1O15428 100 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 MAGEB4O15481 346 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF354AO60765 605 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-205ENST00000410093 RPP14O95059 124 aaKnown RBP12.18□□□□□ -0.46
LIMS1-205ENST00000410093 ECDO95905 644 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-205ENST00000410093 CD2P06729 351 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 FAM157BP0CG42 384 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 TFPIP10646 304 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 SLC6A1P30531 599 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 RAG2P55895 527 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 AP3S2P59780 193 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 LCN6P62502 163 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 FOXF1Q12946 379 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 RSBN1Q5VWQ0 802 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-205ENST00000410093 TIGD3Q6B0B8 471 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 FAM198BQ6UWH4 519 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 STAC2Q6ZMT1 411 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 SLC35D2Q76EJ3 337 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 NDUFAF7Q7L592 441 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 KRT77Q7Z794 578 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 OR4K17Q8NGC6 315 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 OR6F1Q8NGZ6 308 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 OR52N5Q8NH56 324 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 THAP3Q8WTV1 239 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-205ENST00000410093 C8orf44Q96CB5 159 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 TRAF4Q9BUZ4 470 aaPredicted RBP12.18□□□□□ -0.46
LIMS1-205ENST00000410093 ELOVL3Q9HB03 270 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 KLHL13Q9P2N7 655 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 MALT1Q9UDY8 824 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 FOXJ3Q9UPW0 622 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 PCNX2A6NKB5 2137 aa12.18□□□□□ -0.46
LIMS1-205ENST00000410093 MEGF11A6BM72 1044 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 NAP1L6A6NFF2 107 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 PRR32B1ATL7 298 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 SSX4O60224 188 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 PLGP00747 810 aaPredicted RBP12.17□□□□□ -0.46
LIMS1-205ENST00000410093 ISG15P05161 165 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 PSKH1P11801 424 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 CTLA4P16410 223 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 FOLR3P41439 243 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 TOMM20Q15388 145 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 MEP1BQ16820 701 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 LYPD4Q6UWN0 246 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 ARSKQ6UWY0 536 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 SPATC1Q76KD6 591 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 OR10G3Q8NGC4 313 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 RGP1Q92546 391 aaPredicted RBP12.17□□□□□ -0.46
LIMS1-205ENST00000410093 MCHR2Q969V1 340 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 C5orf34Q96MH7 638 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 SCNM1Q9BWG6 230 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 ULBP3Q9BZM4 244 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 STRADBQ9C0K7 418 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 ACTR6Q9GZN1 396 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 PLEKHA1Q9HB21 404 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 GALNT9Q9HCQ5 603 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 SLC17A5Q9NRA2 495 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 SACM1LQ9NTJ5 587 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 MRPL22Q9NWU5 206 aaKnown RBP12.17□□□□□ -0.46
LIMS1-205ENST00000410093 SLC39A1Q9NY26 324 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 SLCO1C1Q9NYB5 712 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 CKLFQ9UBR5 152 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
LIMS1-205ENST00000410093 CACNG2Q9Y698 323 aa12.17□□□□□ -0.46
LIMS1-205ENST00000410093 LINC00854A0A1B0GVQ3 168 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ACOD1A6NK06 481 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 ANXA2P2A6NMY6 339 aa12.16□□□□□ -0.46
LIMS1-205ENST00000410093 KLF7O75840 302 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-205ENST00000410093 DHFRP00374 187 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms