RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CT62P0C5K7 136 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 SLC35E2P0CK97 266 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 HSD17B1P14061 328 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 NQO1P15559 274 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 AZU1P20160 251 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 UQCRC2P22695 453 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 NTSP30990 170 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 FEN1P39748 380 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 MAP3K8P41279 467 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 MAGEA8P43361 318 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 NCBP2P52298 156 aaKnown RBP eCLIP3.61□□□□□ -1.83
CLK1-203ENST00000409769 SLC7A2P52569 658 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 MTPNP58546 118 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 DCDP81605 110 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 FUT7Q11130 342 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 CEACAM7Q14002 265 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 NCF4Q15080 339 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 RGNQ15493 299 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 LTB4RQ15722 352 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 SAMD4BQ5PRF9 694 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 DCAF12Q5T6F0 453 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 WLSQ5T9L3 541 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 C1orf189Q5VU69 101 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 TMEM205Q6UW68 189 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 ZBTB49Q6ZSB9 765 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 TIPARPQ7Z3E1 657 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 NET1Q7Z628 596 aaPredicted RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 HOGA1Q86XE5 327 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 CALHM3Q86XJ0 350 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 OR4N5Q8IXE1 308 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 ZNF440Q8IYI8 595 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 ST13P4Q8IZP2 240 aaPredicted RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 CLEC4FQ8N1N0 589 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 OR2L13Q8N349 312 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 LRRC25Q8N386 305 aaPredicted RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 FBXW8Q8N3Y1 598 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 OR7G2Q8NG99 324 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 OR4A15Q8NGL6 344 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 OR10Q1Q8NGQ4 319 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 MIPOL1Q8TD10 442 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 SFXN5Q8TD22 340 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 APOBEC4Q8WW27 367 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 TSLPQ969D9 159 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 NEURL3Q96EH8 262 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 AURKBQ96GD4 344 aaPredicted RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 C4orf45Q96LM5 186 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 NKX3-1Q99801 234 aaPredicted RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 RBM4BQ9BQ04 359 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 SLC35A5Q9BS91 424 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 THTPAQ9BU02 230 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 ULBP3Q9BZM4 244 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 WWTR1Q9GZV5 400 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 KAT8Q9H7Z6 458 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 WDR54Q9H977 334 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 CXorf21Q9HAI6 301 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 IL1RL2Q9HB29 575 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 ASCL3Q9NQ33 180 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 C14orf105Q9NVL8 296 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.61□□□□□ -1.83
CLK1-203ENST00000409769 GID8Q9NWU2 228 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 MAT2BQ9NZL9 334 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 TRPC4Q9UBN4 977 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 C19orf25Q9UFG5 118 aaPredicted RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 PISDQ9UG56 409 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 SLC7A8Q9UHI5 535 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 PSME2Q9UL46 239 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 RNF150Q9ULK6 438 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 ENTPD4Q9Y227 616 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 MRPS33Q9Y291 106 aaKnown RBP3.61□□□□□ -1.83
CLK1-203ENST00000409769 ZNF780BQ9Y6R6 833 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 EML6Q6ZMW3 1958 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 DMXL1Q9Y485 3027 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 PCNX3Q9H6A9 2034 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 DCHS1Q96JQ0 3298 aa3.61□□□□□ -1.83
CLK1-203ENST00000409769 CPAMD8Q8IZJ3 1885 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 CNTRLQ7Z7A1 2325 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 A0A0J9YWU9 116 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 TRBV5-5A0A0J9YX44 114 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 RNF103-CHMP3A0A140T963 221 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 A0A1W2PQ72 361 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 FAM149AA5PLN7 773 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ANKRD65E5RJM6 399 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 EMC8O43402 210 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ALOX12BO75342 701 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 CRLF1O75462 422 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 KLF7O75840 302 aaPredicted RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 PDE5AO76074 875 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 TNFSF15O95150 251 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 NXPH2O95156 264 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 ANP32DO95626 131 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 KRT75O95678 551 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 IGKV3-11P04433 115 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 KLK3P07288 261 aaPredicted RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 SLC2A2P11168 524 aaPredicted RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 GGT1P19440 569 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 NT5EP21589 574 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 PPIBP23284 216 aaKnown RBP3.6□□□□□ -1.83
CLK1-203ENST00000409769 ME2P23368 584 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 CD82P27701 267 aa3.6□□□□□ -1.83
CLK1-203ENST00000409769 HTR1EP28566 365 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms