RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CGGBP1Q9UFW8 167 aaPredicted RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 IGHV1-45A0A0A0MS14 117 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 PLSCR5A0PG75 271 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 H0YJX3 145 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 RER1O15258 196 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 SERPINA2P20848 420 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 VAMP1P23763 118 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 CDKN2AP42771 156 aaKnown RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 ID4P47928 161 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 SPCS2Q15005 226 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 NKPD1Q17RQ9 610 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 MZT2BQ6NZ67 158 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ADGRG3Q86Y34 549 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 NUBPLQ8TB37 319 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 HOXB13Q92826 284 aaPredicted RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 BORCS8Q96FH0 119 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 NUFIP1Q9UHK0 495 aaKnown RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 NDRG4Q9ULP0 352 aaKnown RBP10.26□□□□□ -0.77
SNX13-202ENST00000409604 SHANK1Q9Y566 2161 aa10.26□□□□□ -0.77
SNX13-202ENST00000409604 ZAR1LA6NP61 321 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 H3BMQ9 156 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 GRPP07492 148 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 CELA3AP09093 270 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 FXYD6P3P58550 94 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 FAM198BQ6UWH4 519 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 FAM83FQ8NEG4 500 aaPredicted RBP10.25□□□□□ -0.77
SNX13-202ENST00000409604 COG8Q96MW5 612 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 FAM117AQ9C073 453 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 DYNLRB1Q9NP97 96 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 ENAMQ9NRM1 1142 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 CMC2Q9NRP2 79 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 STUB1Q9UNE7 303 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 RASD1Q9Y272 281 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 RHBDD3Q9Y3P4 386 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 HSPE1-MOB4S4R3N1 261 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 SLC16A6O15403 523 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 RFPL3SP0C7P2 107 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 ACBD4Q8NC06 268 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 PTTG2Q9NZH5 202 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 PCDHGA1Q9Y5H4 931 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 PRSS37A4D1T9 235 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 METTL21EPA6NDL7 271 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 FIGNL2A6NMB9 653 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 CENPBD1B2RD01 187 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 RGS9O75916 674 aaPredicted RBP10.25□□□□□ -0.77
SNX13-202ENST00000409604 MT-ATP6P00846 226 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 CEACAM1P13688 526 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 SNRPBP14678 240 aaKnown RBP10.25□□□□□ -0.77
SNX13-202ENST00000409604 ZNF658BQ4V348 819 aaPredicted RBP10.25□□□□□ -0.77
SNX13-202ENST00000409604 PLCXD3Q63HM9 321 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 TUSC5Q8IXB3 177 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 APCDD1LQ8NCL9 501 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 ABHD4Q8TB40 342 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 NANOS1Q8WY41 292 aaKnown RBP10.25□□□□□ -0.77
SNX13-202ENST00000409604 SIGLEC12Q96PQ1 595 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 VRK1Q99986 396 aaPredicted RBP10.25□□□□□ -0.77
SNX13-202ENST00000409604 RAB33BQ9H082 229 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 FKRPQ9H9S5 495 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 HHLA2Q9UM44 414 aa10.25□□□□□ -0.77
SNX13-202ENST00000409604 SGCEO43556 437 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 COX6A1P12074 109 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 CTLA4P16410 223 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 SELENOPP49908 381 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 RSU1Q15404 277 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 TMEM69Q5SWH9 247 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 FAM205BPQ63HN1 556 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 KIF18BQ86Y91 864 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 FAM71CQ8NEG0 241 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 OR10K1Q8NGX5 313 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 OR51E1Q8TCB6 317 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 S100A16Q96FQ6 103 aaKnown RBP10.24□□□□□ -0.77
SNX13-202ENST00000409604 A0A0B4J203 849 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 MAPK3P27361 379 aaPredicted RBP10.24□□□□□ -0.77
SNX13-202ENST00000409604 HTR1FP30939 366 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 HOXA6P31267 233 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 GZMMP51124 257 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 ZNF136P52737 540 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 PRKCDQ05655 676 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 SCRN3Q0VDG4 424 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 CLN3Q13286 438 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 PCOLCEQ15113 449 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 OR10K2Q6IF99 312 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 CASTOR1Q8WTX7 329 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 FCRL1Q96LA6 429 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 DMRTB1Q96MA1 342 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 SARGQ9BW04 601 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 B3GALT5Q9Y2C3 310 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 A0A0G2JMM0 328 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 A0A1W2PPB8 328 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 A0A1W2PRS3 328 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 FAM172BPA6NC97 362 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 METTL15A6NJ78 407 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 A8MV72 311 aaPredicted RBP10.24□□□□□ -0.77
SNX13-202ENST00000409604 KIR3DP1A8MWS1 328 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 NPIPB8E9PQR5 432 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 H3BMH7 237 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 GLCEO94923 617 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 GNG2P59768 71 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 RELAQ04206 551 aa10.24□□□□□ -0.77
SNX13-202ENST00000409604 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms