RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FBXW5Q969U6 566 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 NABP1Q96AH0 204 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 NRBF2Q96F24 287 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 NIPSNAP1Q9BPW8 284 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 PLA2G12AQ9BZM1 189 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 SYT4Q9H2B2 425 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 NOX3Q9HBY0 568 aa17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 MAP1AP78559 2803 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-207ENST00000409417 BHLHE40O14503 412 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 CRYAAP02489 173 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 CELA3BP08861 270 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 HIST1H1CP16403 213 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 CTLA4P16410 223 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 CD53P19397 219 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 CDH11P55287 796 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 NAAAQ02083 359 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 SLC36A2Q495M3 483 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 FAM27BQ5VT28 67 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 SHQ1Q6PI26 577 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 FOXL2NBQ6ZUU3 175 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 SLC16A14Q7RTX9 510 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 IL17RDQ8NFM7 739 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 FGFBP3Q8TAT2 258 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 MBD6Q96DN6 1003 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 ZNF75AQ96N20 296 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 SNX18Q96RF0 628 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 CISD1Q9NZ45 108 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 POU2F3Q9UKI9 436 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 FBXL3Q9UKT7 428 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 MOKQ9UQ07 419 aa17.25■□□□□ 0.35
PDLIM2-207ENST00000409417 ATP6V1G2-DDX39BF2Z307 99 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 RAB36O95755 333 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 PATE4P0C8F1 98 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 FCGR1AP12314 374 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 ZNF14P17017 642 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 FASP25445 335 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 PTDSS1P48651 473 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 SGCAQ16586 387 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 JAZF1Q86VZ6 243 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 HS3ST5Q8IZT8 346 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 LNX2Q8N448 690 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 LRRC18Q8N456 261 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 OR8D4Q8NGM9 314 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 OR4K13Q8NH42 304 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 PIGTQ969N2 578 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 KCNS3Q9BQ31 491 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 BDH2Q9BUT1 245 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 SEC61A2Q9H9S3 476 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 TBC1D23Q9NUY8 699 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 SLC16A7O60669 478 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 SOX14O95416 240 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 TP53P04637 393 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 IGFBP1P08833 259 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 ANXA8P13928 327 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 PRKACGP22612 351 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 KPNB1Q14974 876 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 ETFDHQ16134 617 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 MYPOPQ86VE0 399 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 SMAP2Q8WU79 429 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 NMNAT3Q96T66 252 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 CCL19Q99731 98 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 TSSK6Q9BXA6 273 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 NUAK2Q9H093 628 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 KCNN2Q9H2S1 579 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 ZNF556Q9HAH1 456 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 REV1Q9UBZ9 1251 aa17.24■□□□□ 0.35
PDLIM2-207ENST00000409417 RAI1Q7Z5J4 1906 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 A0A1W2PPL8 197 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 E7EQL1 145 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 KHDRBS3O75525 346 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 SERPINA5P05154 406 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 MSR1P21757 451 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 CRABP1P29762 137 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 SLC36A3Q495N2 470 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 SLC35F1Q5T1Q4 408 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 TMEM53Q6P2H8 277 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 LEG1Q6P5S2 330 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 OR2T33Q8NG76 320 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 MS4A3Q96HJ5 214 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 RAB3IPQ96QF0 476 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 RNF121Q9H920 327 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 POLE4Q9NR33 117 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 FAIMQ9NVQ4 179 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 BAIAP2Q9UQB8 552 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 DSCAMO60469 2012 aa17.23■□□□□ 0.35
PDLIM2-207ENST00000409417 IGHV2OR16-5A0A0B4J2B6 119 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 RENP00797 406 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 CST2P09228 141 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 MMP7P09237 267 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 DANCRP0C864 163 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 LAP3P28838 519 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 PGGHGQ32M88 737 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 DNM1P34Q6PK57 102 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 B3GLCTQ6Y288 498 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 GLB1L2Q8IW92 636 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 ATG16L2Q8NAA4 619 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 OR52E2Q8NGJ4 325 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 OR5K1Q8NHB7 308 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 TEX47Q8TBZ9 253 aa17.22■□□□□ 0.35
PDLIM2-207ENST00000409417 IGFBPL1Q8WX77 278 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms