RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MESTQ5EB52 335 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 PMS2CLQ68D20 193 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 OR51D1Q8NGF3 324 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 OR1S1Q8NH92 325 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 TNFAIP8L1Q8WVP5 186 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 C4orf45Q96LM5 186 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 DCBLD2Q96PD2 775 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 DGAT2Q96PD7 388 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 LPAR4Q99677 370 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 FAM60AQ9NP50 221 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 GRHPRQ9UBQ7 328 aa17.92■□□□□ 0.46
CCDC47-202ENST00000403162 CDV3Q9UKY7 258 aaKnown RBP17.92■□□□□ 0.46
CCDC47-202ENST00000403162 MRPS33Q9Y291 106 aaKnown RBP17.92■□□□□ 0.46
CCDC47-202ENST00000403162 TMEM272A0A1B0GTI8 110 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 BLACEA4D250 179 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 PHYHO14832 338 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 F13BP05160 661 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 PROS1P07225 676 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 CTSBP07858 339 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 PPP1CAP62136 330 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 GUCA2AQ02747 115 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 FUT7Q11130 342 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 ZNF660Q6AZW8 331 aaPredicted RBP17.91■□□□□ 0.46
CCDC47-202ENST00000403162 PDZD9Q8IXQ8 264 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 OR6K3Q8NGY3 331 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 TSPAN32Q96QS1 320 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 OR10A5Q9H207 317 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 C1orf198Q9H425 327 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 TTLL8A6PVC2 850 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 CDC40O60508 579 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC47-202ENST00000403162 SRPX2O60687 465 aaPredicted RBP17.91■□□□□ 0.46
CCDC47-202ENST00000403162 PRSS3P35030 304 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 KIR3DL2P43630 455 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 POU3F4P49335 361 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 EGR4Q05215 589 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 RPL18Q07020 188 aaKnown RBP17.91■□□□□ 0.46
CCDC47-202ENST00000403162 TOMM20Q15388 145 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 DEFB110Q30KQ9 67 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 EEF1A1P5Q5VTE0 462 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 FDX2Q6P4F2 183 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 DPY19L4Q7Z388 723 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 BIVMQ86UB2 503 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 OOSP2Q86WS3 158 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 CLEC1AQ8NC01 280 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 OR8K3Q8NH51 312 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 OIT3Q8WWZ8 545 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 LDAHQ9H6V9 325 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 ERVK-19Q9WJR5 959 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 CLDN16Q9Y5I7 305 aa17.91■□□□□ 0.46
CCDC47-202ENST00000403162 TRAV18A0A075B6X5 111 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 A0A0A6YYC8 382 aaPredicted RBP17.9■□□□□ 0.46
CCDC47-202ENST00000403162 I3L1I5 382 aaPredicted RBP17.9■□□□□ 0.46
CCDC47-202ENST00000403162 RENP00797 406 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 AFF3P51826 1226 aaKnown RBP17.9■□□□□ 0.46
CCDC47-202ENST00000403162 UBE2MP61081 183 aaKnown RBP17.9■□□□□ 0.46
CCDC47-202ENST00000403162 SKP2Q13309 424 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 ZNF273Q14593 569 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 YOD1Q5VVQ6 348 aaPredicted RBP17.9■□□□□ 0.46
CCDC47-202ENST00000403162 NUP54Q7Z3B4 507 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 INTS14Q96SY0 518 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 TMEM138Q9NPI0 162 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 PRTFDC1Q9NRG1 225 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 H7C1C5 153 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 SLC17A2O00624 439 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 ITGB2P05107 769 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 CTSEP14091 401 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 MPGP29372 298 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 BLKP51451 505 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 MAZP56270 477 aaKnown RBP17.9■□□□□ 0.46
CCDC47-202ENST00000403162 LCN6P62502 163 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 GRM7Q14831 915 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 CD226Q15762 336 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 ZNF615Q8N8J6 731 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 GATSQ8NAP1 163 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 GPX8Q8TED1 209 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 DMRTA2Q96SC8 542 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 ULBP3Q9BZM4 244 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 SEMA6CQ9H3T2 930 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 EXO5Q9H790 373 aa17.9■□□□□ 0.46
CCDC47-202ENST00000403162 SPTBP11277 2137 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 LOC100289279A0A1B0GTE1 492 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 H3BUI4 141 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 LGALS8O00214 317 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 OIP5O43482 229 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 CDC123O75794 336 aaPredicted RBP17.89■□□□□ 0.45
CCDC47-202ENST00000403162 KDM4BO94953 1096 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 WNT11O96014 354 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 CD3DP04234 171 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 ITGA5P08648 1049 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 ST6GAL1P15907 406 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 NXPH1P58417 271 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 RAB11BQ15907 218 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 PRTGQ2VWP7 1150 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 WDR38Q5JTN6 314 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 STEAP1BQ6NZ63 245 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 GPBAR1Q8TDU6 330 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 FAM3DQ96BQ1 224 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 MFFQ9GZY8 342 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 SDK1Q7Z5N4 2213 aa17.89■□□□□ 0.45
CCDC47-202ENST00000403162 RFPL4AA6NLU0 287 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms