RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MRPL13Q9BYD1 178 aaKnown RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 OR51B6Q9H340 312 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 RNF121Q9H920 327 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 NMNAT1Q9HAN9 279 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 SPAG4Q9NPE6 437 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF346Q9UL40 294 aaKnown RBP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 FZR1Q9UM11 496 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 HIF3AQ9Y2N7 669 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ARL2BPQ9Y2Y0 163 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 UGT2A1Q9Y4X1 527 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 ENPP4Q9Y6X5 453 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 PMF1-BGLAPU3KQ54 211 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 MXRA5Q9NR99 2828 aa4.98□□□□□ -1.61
HMGB1P20-201ENST00000402555 YLPM1P49750 1951 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 A0A096LNT2 108 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 TRBV4-1A0A0J9YWV2 114 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 FAM171A2A8MVW0 826 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 B9A039 149 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 NDUFAB1O14561 156 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 UBL3O95164 117 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 IGF2P01344 180 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 H1F0P07305 194 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 IGFBP1P08833 259 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 OR8G3PP0DMU2 310 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF35P13682 527 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF26P17031 533 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 EPHA1P21709 976 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 NR4A1P22736 598 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 PAX7P23759 505 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 SLC9A3P48764 834 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF84P51523 738 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 EFNA4P52798 201 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 RPL27P61353 136 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 MXRA7P84157 204 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 VLDLRP98155 873 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 MAD2L1BPQ15013 274 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 SEC23BQ15437 767 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 SGCAQ16586 387 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 HIST3H3Q16695 136 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 FGD3Q5JSP0 725 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 OTPQ5XKR4 325 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 CLEC2AQ6UVW9 174 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 MBOAT2Q6ZWT7 520 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 SLC16A14Q7RTX9 510 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 OAFQ86UD1 273 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 LRP11Q86VZ4 500 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 CYP4Z1Q86W10 505 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 DEFB107AQ8IZN7 70 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 OR10H5Q8NGA6 315 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 OR52J3Q8NH60 311 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 SLC7A13Q8TCU3 470 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 C10orf105Q8TEF2 133 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 ACOT11Q8WXI4 607 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 FAM168AQ92567 244 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 NMD3Q96D46 503 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 FAM46AQ96IP4 442 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 C7orf34Q96L11 122 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 FOXN4Q96NZ1 517 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 LRRC37BQ96QE4 947 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 CDRT15Q96T59 188 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 SEPHS2Q99611 448 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 DOK1Q99704 481 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 SYT3Q9BQG1 590 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 MRPL37Q9BZE1 423 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 TXNIPQ9H3M7 391 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 TPK1Q9H3S4 243 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 PLK3Q9H4B4 646 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 ZNF442Q9H7R0 627 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 MOV10Q9HCE1 1003 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 DCAF13Q9NV06 445 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 NDUFAF4Q9P032 175 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 MYEF2Q9P2K5 600 aaKnown RBP4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 IL20RAQ9UHF4 553 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 TAGLN3Q9UI15 199 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 RPS6KA6Q9UK32 745 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 ADAM18Q9Y3Q7 739 aa4.97□□□□□ -1.61
HMGB1P20-201ENST00000402555 A0A1W2PPL8 197 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 KIAA1324LA8MWY0 1029 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 LYNX1G3V0Z9 82 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 IMPA2O14732 288 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ARPC2O15144 300 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 MGRN1O60291 552 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 GMNNO75496 209 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 DCTN3O75935 186 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 PDE5AO76074 875 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 FARS2O95363 451 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGLV1-40P01703 118 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGHMP01871 453 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 SERPINA5P05154 406 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 SCG5P05408 212 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ADRA2AP08913 450 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 MMP7P09237 267 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 LYNX1P0DP58 116 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 HSD17B1P14061 328 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF32P17041 273 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 APEX1P27695 318 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 RPL4P36578 427 aaKnown RBP4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 ALDH3B1P43353 468 aa4.96□□□□□ -1.62
HMGB1P20-201ENST00000402555 PDLIM4P50479 330 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms