RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 NTNG2Q96CW9 530 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM71F1Q96KD3 344 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 RHCGQ9UBD6 479 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM221AA4D161 298 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 CA2P00918 260 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 OPN1MWP04001 364 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 OPN1MW2P0DN77 364 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 OPN1MW3P0DN78 364 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 RIGQ13278 110 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 C19orf43Q9BQ61 176 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 EPHX3Q9H6B9 360 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 PGAP2Q9UHJ9 254 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 CACNG3O60359 315 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 UBL3O95164 117 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 EFNA1P20827 205 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 BLVRBP30043 206 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF776Q68DI1 518 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SEH1LQ96EE3 360 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 TRAPPC4Q9Y296 219 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM262E9PQX1 116 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 PRAMEF11O60813 436 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 DUS4LO95620 317 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF8P17098 575 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 LSAMPQ13449 338 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 NFATC2Q13469 925 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC7A10Q9NS82 523 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 OR5AC2Q9NZP5 309 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 CNTNAP5Q8WYK1 1306 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 DRD2P14416 443 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 OPRK1P41145 380 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 VEZF1Q14119 521 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SYN3O14994 580 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC43A1O75387 559 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 DIO3P55073 304 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 GPR85P60893 370 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SLC10A2Q12908 348 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 TARBP2Q15633 366 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF426Q9BUY5 554 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SPNS1Q9H2V7 528 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 TGIF2-C20orf24A0A0A6YYL0 155 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SOX15O60248 233 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 AHSGP02765 367 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 NPBWR2P48146 333 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 GP2P55259 537 aaKnown RBP7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 MS4A4EQ96PG1 132 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 CITED1Q99966 193 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 PRDM7Q9NQW5 492 aa7.97□□□□□ -1.13
CACNA1C-220ENST00000399655 SSSCA1O60232 199 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 PCBP4P57723 403 aaKnown RBP7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 CTXN1P60606 82 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 DLK1P80370 383 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 DRAM2Q6UX65 266 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM136Q6ZRR5 245 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 MISPQ8IVT2 679 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM151AQ8WW52 585 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 TMEM147Q9BVK8 224 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 HDAC8Q9BY41 377 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 KIR3DL2P43630 455 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 PCP4P48539 62 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 HBA1P69905 142 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 ILKQ13418 452 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 GAB1Q13480 694 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM156AQ8NDB6 213 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 EMC9Q9Y3B6 208 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 TIMM13Q9Y5L4 95 aaPredicted RBP7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 ID1P41134 155 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 ZNF528Q3MIS6 628 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 HUS1BQ8NHY5 278 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 PHYHIPQ92561 330 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 HRASLS5Q96KN8 279 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 CALHM2Q9HA72 323 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 RARRES1P49788 294 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 HTRA3P83110 453 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 SRSF5Q13243 272 aaKnown RBP7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 NANOGP8Q6NSW7 305 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 RHBDD2Q6NTF9 364 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 PLBD1Q6P4A8 553 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 FAM198AQ9UFP1 575 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 CYB5R1Q9UHQ9 305 aa7.96□□□□□ -1.13
CACNA1C-220ENST00000399655 A2MP01023 1474 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 UBE2L5PA0A1B0GUS4 154 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 TMEM221A6NGB7 291 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 ICAM2P13598 275 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 ACVRL1P37023 503 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 TAS2R40P59535 323 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 SEMA3BQ13214 749 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 RBFOX1Q9NWB1 397 aaKnown RBP7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 CNOT2Q9NZN8 540 aaKnown RBP7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 CEP152O94986 1710 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC6A11P48066 632 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 DNAJB13P59910 316 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 OR6K2Q8NGY2 324 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 ADAT1Q9BUB4 502 aaKnown RBP7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 SLC46A2Q9BY10 475 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 PARD6GQ9BYG4 376 aaPredicted RBP7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 TAC3Q9UHF0 121 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 GSG1L2A8MUP6 293 aa7.96□□□□□ -1.14
CACNA1C-220ENST00000399655 NPIPB6E9PJ23 425 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms