RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 HLFQ16534 295 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 TMEM35AQ53FP2 167 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 PPM1LQ5SGD2 360 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 ELP2Q6IA86 826 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 HACD2Q6Y1H2 254 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 ZNF836Q6ZNA1 936 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 ARHGEF19Q8IW93 802 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 PGAM4Q8N0Y7 254 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 ZNF738Q8NE65 137 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 OR2L5Q8NG80 312 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 OR10J5Q8NHC4 309 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 MRPL24Q96A35 216 aaKnown RBP5.88□□□□□ -1.47
SMCO1-201ENST00000397537 CDCA3Q99618 268 aaPredicted RBP5.88□□□□□ -1.47
SMCO1-201ENST00000397537 URM1Q9BTM9 101 aaKnown RBP5.88□□□□□ -1.47
SMCO1-201ENST00000397537 ACTR3CQ9C0K3 210 aaPredicted RBP5.88□□□□□ -1.47
SMCO1-201ENST00000397537 DEFB129Q9H1M3 183 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 DDX19AQ9NUU7 478 aaKnown RBP5.88□□□□□ -1.47
SMCO1-201ENST00000397537 DKK2Q9UBU2 259 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 STOML2Q9UJZ1 356 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 ERVW-1Q9UQF0 538 aa5.88□□□□□ -1.47
SMCO1-201ENST00000397537 POLR3HQ9Y535 204 aaPredicted RBP5.88□□□□□ -1.47
SMCO1-201ENST00000397537 ATRXP46100 2492 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 A0A0G2JK05 382 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 A0A1B0GTI1 187 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 LINC00473A8K010 186 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 CCSO14618 274 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 GOSR2O14653 212 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 CST8O60676 142 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 TRMUO75648 421 aaKnown RBP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 ZP3P21754 424 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 RPL5P46777 297 aaKnown RBP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 RAB13P51153 203 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 DHODHQ02127 395 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 RBM39Q14498 530 aaKnown RBP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 EMC2Q15006 297 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 C3AR1Q16581 482 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 SLC36A2Q495M3 483 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 IDNKQ5T6J7 187 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 TCEAL6Q6IPX3 200 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 BTNL3Q6UXE8 466 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 SLC16A12Q6ZSM3 486 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 AHSA2Q719I0 299 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 SMIM15Q7Z3B0 74 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 DPPA2Q7Z7J5 298 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 GLCCI1Q86VQ1 547 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 CMTM1Q8IZ96 169 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 EID3Q8N140 333 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 WFIKKN2Q8TEU8 576 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 PNPLA2Q96AD5 504 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 WDR34Q96EX3 536 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 CENPNQ96H22 339 aaPredicted RBP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 ZNF641Q96N77 438 aaPredicted RBP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 PPP1R2P1Q96PQ5 205 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 ALX4Q9H161 411 aaPredicted RBP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 METTL9Q9H1A3 318 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 PORCNQ9H237 461 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 HRASLSQ9HDD0 168 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 SLC22A13Q9Y226 551 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 UTP11Q9Y3A2 253 aaKnown RBP5.87□□□□□ -1.47
SMCO1-201ENST00000397537 R4GN57 208 aa5.87□□□□□ -1.47
SMCO1-201ENST00000397537 MYMKA6NI61 221 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 EPHB6O15197 1021 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 NUAK1O60285 661 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 EIF4E2O60573 245 aaKnown RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 ANXA9O76027 345 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 TTLL1O95922 423 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 GATA1P15976 413 aaPredicted RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 CRABP1P29762 137 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 DDOSTP39656 456 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 FOLR3P41439 243 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 MEOX2P50222 304 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 BTG1P62324 171 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 CDKL1Q00532 357 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 MAD2L1BPQ15013 274 aaPredicted RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 ZNHIT3Q15649 155 aaPredicted RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 PRTGQ2VWP7 1150 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 TRIM16LQ309B1 348 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 CHRFAM7AQ494W8 412 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 FAHD1Q6P587 224 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 CCDC71LQ8N9Z2 235 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 OR4D9Q8NGE8 314 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 OR2Y1Q8NGV0 311 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 LYPD6BQ8NI32 183 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 RNASEH2CQ8TDP1 164 aaKnown RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 FAM222BQ8WU58 562 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 TCEAL3Q969E4 200 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 FAF2Q96CS3 445 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 CCDC126Q96EE4 140 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 GNRHR2Q96P88 292 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 MICU1Q9BPX6 476 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 WDR77Q9BQA1 342 aaPredicted RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 NIPAL2Q9H841 368 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 FGF20Q9NP95 211 aaPredicted RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 IFT46Q9NQC8 304 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 FGFR1OP2Q9NVK5 253 aa5.86□□□□□ -1.47
SMCO1-201ENST00000397537 NLE1Q9NVX2 485 aaPredicted RBP5.86□□□□□ -1.47
SMCO1-201ENST00000397537 DUS2Q9NX74 493 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms