RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 OR1Q1Q15612 314 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 ESCO2Q56NI9 601 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 SPRNQ5BIV9 151 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 ZMAT1Q5H9K5 638 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 SPATA46Q5T0L3 261 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 SWT1Q5T5J6 900 aaKnown RBP12.59□□□□□ -0.39
SEC13-206ENST00000397102 UNQ6126/PRO20091Q6UXV3 157 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 MSANTD1Q6ZTZ1 278 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 SLC25A40Q8TBP6 338 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 KLF14Q8TD94 323 aaPredicted RBP12.59□□□□□ -0.39
SEC13-206ENST00000397102 UBE2FQ969M7 185 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 UPRTQ96BW1 309 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 ITCHQ96J02 903 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 RMND5AQ9H871 391 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 TMEM106BQ9NUM4 274 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 EIF3KQ9UBQ5 218 aaKnown RBP12.59□□□□□ -0.39
SEC13-206ENST00000397102 IL20RAQ9UHF4 553 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
SEC13-206ENST00000397102 MDFIC2A0A1B0GVS7 189 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 H3BSA7 217 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 BIRC5O15392 142 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 NDUFA7O95182 113 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 NGFP01138 241 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 CRYBA1P05813 215 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 STOMP27105 288 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 CD80P33681 288 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 WNT5AP41221 380 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 ZNF84P51523 738 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 CDH12P55289 794 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 RGS8P57771 180 aaPredicted RBP12.58□□□□□ -0.4
SEC13-206ENST00000397102 BTG1P62324 171 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 TNFAIP6P98066 277 aaPredicted RBP12.58□□□□□ -0.4
SEC13-206ENST00000397102 HNRNPA0Q13151 305 aaKnown RBP12.58□□□□□ -0.4
SEC13-206ENST00000397102 FBLN7Q53RD9 439 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 PABPC1L2AQ5JQF8 200 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 LRRC28Q86X40 367 aaPredicted RBP12.58□□□□□ -0.4
SEC13-206ENST00000397102 C1orf174Q8IYL3 243 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 LRRC18Q8N456 261 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 ZNF283Q8N7M2 679 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 BHLHE22Q8NFJ8 381 aaPredicted RBP12.58□□□□□ -0.4
SEC13-206ENST00000397102 POM121L2Q96KW2 1035 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 RBM4BQ9BQ04 359 aaKnown RBP12.58□□□□□ -0.4
SEC13-206ENST00000397102 SPATA5L1Q9BVQ7 753 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 SLC19A3Q9BZV2 496 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 OR2J1Q9GZK6 312 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 RAD21L1Q9H4I0 556 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 PRDM13Q9H4Q3 707 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 PNPOQ9NVS9 261 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 LRCH1Q9Y2L9 728 aa12.58□□□□□ -0.4
SEC13-206ENST00000397102 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 CLPSL1A2RUU4 121 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 SRRM5B3KS81 715 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 RNF13O43567 381 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 TPST1O60507 370 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 SLC22A3O75751 556 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 ALX3O95076 343 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 IGHG1P01857 330 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 HIST3H3Q16695 136 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 C6orf10Q5SRN2 563 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 CEP85LQ5SZL2 805 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 FAM205BPQ63HN1 556 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 BTNL3Q6UXE8 466 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 LRRN1Q6UXK5 716 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 MCHR2Q969V1 340 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 KCNN2Q9H2S1 579 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 MSL2Q9HCI7 577 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 TAS2R5Q9NYW4 299 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 C1RLQ9NZP8 487 aa12.57□□□□□ -0.4
SEC13-206ENST00000397102 C5orf49A4QMS7 147 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 CLIC1O00299 241 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 TPST2O60704 377 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 TGDSO95455 350 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 IDO1P14902 403 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 TNFRSF1AP19438 455 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 CLRN1P58418 232 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 RELBQ01201 579 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 PAX2Q02962 417 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 IFFO1Q0D2I5 559 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 ZMYND11Q15326 602 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 ZNF74Q16587 644 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 DEFB112Q30KQ8 113 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 ASPHD2Q6ICH7 369 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 FIP1L1Q6UN15 594 aaKnown RBP12.56□□□□□ -0.4
SEC13-206ENST00000397102 LINC00114Q6XXX2 140 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 RFPL4BQ6ZWI9 263 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 RANBP3LQ86VV4 465 aaPredicted RBP12.56□□□□□ -0.4
SEC13-206ENST00000397102 KRT73Q86Y46 540 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 C1QL4Q86Z23 238 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 NFKBIDQ8NI38 313 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.56□□□□□ -0.4
SEC13-206ENST00000397102 ZDHHC16Q969W1 377 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 SAMD8Q96LT4 415 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 SIGLEC11Q96RL6 698 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 ZNF347Q96SE7 839 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 ARHGDIGQ99819 225 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 ROPN1BQ9BZX4 212 aaPredicted RBP12.56□□□□□ -0.4
SEC13-206ENST00000397102 NANOGQ9H9S0 305 aa12.56□□□□□ -0.4
SEC13-206ENST00000397102 ROPN1Q9HAT0 212 aaPredicted RBP12.56□□□□□ -0.4
SEC13-206ENST00000397102 CCNB1IP1Q9NPC3 277 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms