RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 HSD17B6O14756 317 aa6.61□□□□□ -1.35
UPF2-203ENST00000397053 SLCO2B1O94956 709 aa6.61□□□□□ -1.35
UPF2-203ENST00000397053 CSF3P09919 207 aa6.61□□□□□ -1.35
UPF2-203ENST00000397053 SRP9P49458 86 aaKnown RBP6.61□□□□□ -1.35
UPF2-203ENST00000397053 ADPRHP54922 357 aa6.61□□□□□ -1.35
UPF2-203ENST00000397053 INSM1Q01101 510 aaPredicted RBP6.61□□□□□ -1.35
UPF2-203ENST00000397053 ANKRD34AQ69YU3 496 aa6.61□□□□□ -1.35
UPF2-203ENST00000397053 RGS7BPQ6MZT1 257 aaPredicted RBP6.61□□□□□ -1.35
UPF2-203ENST00000397053 GLIPR1L1Q6UWM5 242 aa6.61□□□□□ -1.35
UPF2-203ENST00000397053 CPEB2Q7Z5Q1 589 aaKnown RBP6.61□□□□□ -1.35
UPF2-203ENST00000397053 ANKRD13BQ86YJ7 626 aa6.61□□□□□ -1.35
UPF2-203ENST00000397053 MS4A8Q9BY19 250 aa6.61□□□□□ -1.35
UPF2-203ENST00000397053 CNOT2Q9NZN8 540 aaKnown RBP6.61□□□□□ -1.35
UPF2-203ENST00000397053 MAP2P11137 1827 aaKnown RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 ZFP92A6NM28 416 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 H0Y8X5 98 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 H0YIV9 168 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SIRPB1O00241 398 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 ARNTLO00327 626 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 PPIHO43447 177 aaKnown RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 ANGPTL7O43827 346 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 RFPL3O75679 317 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SCGB1D1O95968 90 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 METTL15P1P0C7V9 234 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 BMP2P12643 396 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 TAS2R45P59539 299 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SELENBP1Q13228 472 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 ILKQ13418 452 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 TPBGQ13641 420 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 OPCMLQ14982 345 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 TCEAL1Q15170 157 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SOHLH1Q5JUK2 328 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 TMEM81Q6P7N7 255 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 ABHD17CQ6PCB6 329 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 TFAP2EQ6VUC0 442 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 DPY19L2P2Q6ZN68 376 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 CBLL1Q75N03 491 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 MOB3BQ86TA1 216 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 ANGPTL5Q86XS5 388 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 ETFBKMTQ8IXQ9 262 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 OR52N5Q8NH56 324 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 ARRDC2Q8TBH0 407 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 M1APQ8TC57 530 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SEC22AQ96IW7 307 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 TXLNGYQ9BZA5 131 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 NECAP2Q9NVZ3 263 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SPATA31D1Q6ZQQ2 1576 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 A0A1W2PNR3 127 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 K7EQS6 105 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 M0R082 166 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 NDUFB3O43676 98 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 CNMDO75829 334 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 NXPH3O95157 252 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 MPLP40238 635 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 HNRNPFP52597 415 aaKnown RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 IHHQ14623 411 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 RBMS2Q15434 407 aaKnown RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 DUSP6Q16828 381 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 TATDN3Q17R31 274 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 OR2G6Q5TZ20 316 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SLC36A1Q7Z2H8 476 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 ZNF573Q86YE8 665 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 CCDC71Q8IV32 467 aaPredicted RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.6□□□□□ -1.35
UPF2-203ENST00000397053 OR51A4Q8NGJ6 313 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 OR5M9Q8NGP3 310 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 OR51F2Q8NH61 342 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 GHSRQ92847 366 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 CSNK1G1Q9HCP0 422 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 MED17Q9NVC6 651 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 COA3Q9Y2R0 106 aaPredicted RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 GPR55Q9Y2T6 319 aaPredicted RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 USP3Q9Y6I4 520 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 BHLHE40O14503 412 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 CYTIPO60759 359 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 HPGDSO60760 199 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 MRPS14O60783 128 aaKnown RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 PIAS2O75928 621 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SNAPINO95295 136 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 DTYMKP23919 212 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SOX18P35713 384 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 HOXA4Q00056 320 aaPredicted RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 REEP5Q00765 189 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SORDQ00796 357 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 NFATC3Q12968 1075 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 EIF3IQ13347 325 aaKnown RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 LRRC10Q5BKY1 277 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 OR2B11Q5JQS5 317 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 GLYATL3Q5SZD4 288 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SLCO4C1Q6ZQN7 724 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 RFLNAQ6ZTI6 216 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 FAM58AQ8N1B3 248 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 NKAIN3Q8N8D7 197 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 OR6M1Q8NGM8 313 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 TERB2Q8NHR7 220 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 SLC38A5Q8WUX1 472 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 Q96M85 177 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 CHST8Q9H2A9 424 aa6.6□□□□□ -1.35
UPF2-203ENST00000397053 ZNF71Q9NQZ8 489 aaPredicted RBP6.6□□□□□ -1.35
UPF2-203ENST00000397053 GPR173Q9NS66 373 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms