RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 LINC01590Q5TEZ4 76 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 SLC25A47Q6Q0C1 308 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 FAM220AQ7Z4H9 259 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-202ENST00000396308 UBE2J2Q8N2K1 259 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 ZNF454Q8N9F8 522 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 ZNF511Q8NB15 262 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 SNX33Q8WV41 574 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 SIGLEC11Q96RL6 698 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 ALG8Q9BVK2 526 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 RBM24Q9BX46 236 aaKnown RBP13.65□□□□□ -0.22
VAMP1-202ENST00000396308 MARCH7Q9H992 704 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 ASF1BQ9NVP2 202 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 ERVK13-1Q9NX77 482 aa13.65□□□□□ -0.22
VAMP1-202ENST00000396308 FOXD3Q9UJU5 478 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-202ENST00000396308 FASNP49327 2511 aaKnown RBP13.64□□□□□ -0.23
VAMP1-202ENST00000396308 NOL3O60936 208 aaKnown RBP13.64□□□□□ -0.23
VAMP1-202ENST00000396308 JUNBP17275 347 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-202ENST00000396308 MAP2K4P45985 399 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 ETV1P50549 477 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 ZNF133P52736 654 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-202ENST00000396308 WNT4P56705 351 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 GALEQ14376 348 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 IRF3Q14653 427 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 STK11Q15831 433 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 SLC18B1Q6NT16 456 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 RPTNQ6XPR3 784 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 SLC26A10Q8NG04 563 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 OR2AJ1Q8NGZ0 328 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 OR52N1Q8NH53 320 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 ASB17Q8WXJ9 295 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 NMD3Q96D46 503 aaKnown RBP13.64□□□□□ -0.23
VAMP1-202ENST00000396308 ALKBH3Q96Q83 286 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-202ENST00000396308 TTYH2Q9BSA4 534 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 NELFAQ9H3P2 528 aa13.64□□□□□ -0.23
VAMP1-202ENST00000396308 ING1Q9UK53 422 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-202ENST00000396308 CAB39Q9Y376 341 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-202ENST00000396308 MBD3L4A6NDZ8 208 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 MBD3L3A6NE82 208 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 MBD3L5A6NJ08 208 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 ZNF593O00488 134 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 SLC19A2O60779 497 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 FARS2O95363 451 aaKnown RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 IL2RAP01589 272 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 MT-ND5P03915 603 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 CRHP06850 196 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 GAAP10253 952 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 NPR2P20594 1047 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 MSR1P21757 451 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 PCMT1P22061 227 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 SIRPAP78324 504 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 ROR2Q01974 943 aaKnown RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 LY6DQ14210 128 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 SPHARQ15513 63 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 ETFDHQ16134 617 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 PRR30Q53SZ7 412 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 UBE2UQ5VVX9 321 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 KCTD18Q6PI47 426 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 PLXDC2Q6UX71 529 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 PLEKHG7Q6ZR37 379 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 FAM214BQ7L5A3 538 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 FGD2Q7Z6J4 655 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 LHFPL3Q86UP9 236 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 TIGD4Q8IY51 512 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 NANOGP1Q8N7R0 232 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 CNEP1R1Q8N9A8 125 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 OR6K3Q8NGY3 331 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 MBD3L2Q8NHZ7 208 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-202ENST00000396308 HAVCR2Q8TDQ0 301 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 MUL1Q969V5 352 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 FOXN4Q96NZ1 517 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 KCNN2Q9H2S1 579 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 C12orf49Q9H741 205 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 CRLF2Q9HC73 371 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 TAS2R16Q9NYV7 291 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 NDUFA13Q9P0J0 144 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 GTF3C1Q12789 2109 aa13.63□□□□□ -0.23
VAMP1-202ENST00000396308 PKD1L2Q7Z442 2459 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 A0A1W2PQL4 384 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-202ENST00000396308 J3QRE1 110 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 PTHP01270 115 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 TFP02787 698 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 TFAP2AP05549 437 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 KRT8P05787 483 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 TACSTD2P09758 323 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 LIMS3P0CW19 117 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 LIMS4P0CW20 117 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 HSMCR30P0CW71 290 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 SH3BGRP55822 239 aaPredicted RBP13.62□□□□□ -0.23
VAMP1-202ENST00000396308 TAS2R43P59537 309 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 MRPS34P82930 218 aaKnown RBP13.62□□□□□ -0.23
VAMP1-202ENST00000396308 EIF2B1Q14232 305 aaKnown RBP13.62□□□□□ -0.23
VAMP1-202ENST00000396308 SGCAQ16586 387 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 TIGD6Q17RP2 521 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 TEX30Q5JUR7 227 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 XAF1Q6GPH4 301 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 LRFN4Q6PJG9 635 aa13.62□□□□□ -0.23
VAMP1-202ENST00000396308 LYPD4Q6UWN0 246 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms