RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TMEM53Q6P2H8 277 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 CD300LDQ6UXZ3 194 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 IL17RDQ8NFM7 739 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 PIGTQ969N2 578 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 DUS3LQ96G46 650 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 ZNF224Q9NZL3 707 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 VSX1Q9NZR4 365 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 FBXL3Q9UKT7 428 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 MOKQ9UQ07 419 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 DSCAMO60469 2012 aa16.53■□□□□ 0.24
PDLIM7-204ENST00000393546 PATE4P0C8F1 98 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 CDKN2AP42771 156 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 GIPRP48546 466 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 NAAAQ02083 359 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 CLEC12AQ5QGZ9 265 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 PTCHD4Q6ZW05 846 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 JAZF1Q86VZ6 243 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 LRRC18Q8N456 261 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 FGFBP3Q8TAT2 258 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 SMAP2Q8WU79 429 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 HTRA1Q92743 480 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 MBD6Q96DN6 1003 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 NRBF2Q96F24 287 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 CCL19Q99731 98 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 NIPSNAP1Q9BPW8 284 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 ZNF556Q9HAH1 456 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 TBC1D23Q9NUY8 699 aa16.52■□□□□ 0.24
PDLIM7-204ENST00000393546 A0A1W2PPL8 197 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 E7EQL1 145 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 SLC16A7O60669 478 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 KHDRBS3O75525 346 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 RENP00797 406 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 CELA3BP08861 270 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 ANXA8P13928 327 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 HIST1H1CP16403 213 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 FASP25445 335 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 FAM27BQ5VT28 67 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 LEG1Q6P5S2 330 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 OR4K13Q8NH42 304 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 NABP1Q96AH0 204 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 SNX18Q96RF0 628 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 BDH2Q9BUT1 245 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 TSSK6Q9BXA6 273 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 SYT4Q9H2B2 425 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 RERGLQ9H628 205 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 NOX3Q9HBY0 568 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 FAIMQ9NVQ4 179 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 RAI1Q7Z5J4 1906 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 CCDC168Q8NDH2 2452 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 CSMD1Q96PZ7 3565 aa16.51■□□□□ 0.23
PDLIM7-204ENST00000393546 ATP6V1G2-DDX39BF2Z307 99 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 FCGR1AP12314 374 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 CTLA4P16410 223 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 ZNF14P17017 642 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 PRKACGP22612 351 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 CRABP1P29762 137 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 PLP2Q04941 152 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 RAB39AQ14964 217 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 ATP6AP1Q15904 470 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 ETFDHQ16134 617 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 DEFB113Q30KQ7 82 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 SLC35F1Q5T1Q4 408 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 SHQ1Q6PI26 577 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 DNM1P34Q6PK57 102 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 FOXL2NBQ6ZUU3 175 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 C10orf67Q8IYJ2 551 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 OR4F15Q8NGB8 312 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 TMEM171Q8WVE6 324 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 ZNF75AQ96N20 296 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 RAB3IPQ96QF0 476 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 NMNAT3Q96T66 252 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 DHRS9Q9BPW9 319 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 PLA2G12AQ9BZM1 189 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 NUAK2Q9H093 628 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 NTN4Q9HB63 628 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 CCNB1IP1Q9NPC3 277 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 BEX4Q9NWD9 120 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 BAIAP2Q9UQB8 552 aa16.5■□□□□ 0.23
PDLIM7-204ENST00000393546 BHLHE40O14503 412 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 TMCC2O75069 709 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 SOX14O95416 240 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 PTHP01270 115 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 SERPINA5P05154 406 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 IGFBP1P08833 259 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 CST2P09228 141 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 MSR1P21757 451 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 LAP3P28838 519 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 FABP6P51161 128 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 ACTR3P61158 418 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 PCBD1P61457 104 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 YTHDF3Q7Z739 585 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 MYPOPQ86VE0 399 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 HS3ST5Q8IZT8 346 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 ATG16L2Q8NAA4 619 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 OR2T33Q8NG76 320 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 OR52E2Q8NGJ4 325 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 OR8D4Q8NGM9 314 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 OR5K1Q8NHB7 308 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 MS4A3Q96HJ5 214 aa16.49■□□□□ 0.23
PDLIM7-204ENST00000393546 SRA1Q9HD15 236 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms