RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 POFUT2Q9Y2G5 429 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 NTNG1Q9Y2I2 539 aa17.21■□□□□ 0.34
CCDC50-202ENST00000392456 TRBV4-1A0A0J9YWV2 114 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 CRTAPO75718 401 aaPredicted RBP17.2■□□□□ 0.34
CCDC50-202ENST00000392456 AGR2O95994 175 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 GIPP09681 153 aaPredicted RBP17.2■□□□□ 0.34
CCDC50-202ENST00000392456 GNALP38405 381 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 LIMS1P48059 325 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF561Q8N587 486 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 OR9Q2Q8NGE9 314 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 NIPSNAP1Q9BPW8 284 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 LMF2Q9BU23 707 aaKnown RBP17.2■□□□□ 0.34
CCDC50-202ENST00000392456 MKKSQ9NPJ1 570 aaPredicted RBP17.2■□□□□ 0.34
CCDC50-202ENST00000392456 RASL12Q9NYN1 266 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 A4GNTQ9UNA3 340 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 NTN1O95631 604 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 RAB3DO95716 219 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 DDAH2O95865 285 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 IFI6P09912 130 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 ZGLP1P0C6A0 271 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 FAM199XQ6PEV8 388 aaPredicted RBP17.2■□□□□ 0.34
CCDC50-202ENST00000392456 TMEM185AQ8NFB2 350 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 WNT2BQ93097 391 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 TMEM203Q969S6 136 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 PINK1Q9BXM7 581 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 CACNG6Q9BXT2 260 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 NPDC1Q9NQX5 325 aaPredicted RBP17.2■□□□□ 0.34
CCDC50-202ENST00000392456 CALML5Q9NZT1 146 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 KCND3Q9UK17 655 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF292O60281 2723 aa17.2■□□□□ 0.34
CCDC50-202ENST00000392456 A0A087X0M5 115 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 A0A1B0GX30 115 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 SLC19A2O60779 497 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 IFNA2P01563 188 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 ANXA8P13928 327 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 CNR1P21554 472 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 SLC37A1P57057 533 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 PLAURQ03405 335 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 MOB3CQ70IA8 216 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 AGBL5Q8NDL9 886 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 OR5J2Q8NH18 312 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 HMSDA8MTL9 139 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 NQO2P16083 231 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 SRP9P49458 86 aaKnown RBP17.19■□□□□ 0.34
CCDC50-202ENST00000392456 FOXO1Q12778 655 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 ZSWIM7Q19AV6 140 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 LYPD4Q6UWN0 246 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF836Q6ZNA1 936 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 UBL7Q96S82 380 aaPredicted RBP17.19■□□□□ 0.34
CCDC50-202ENST00000392456 RPS6KB2Q9UBS0 482 aa17.19■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF443Q9Y2A4 671 aaPredicted RBP17.19■□□□□ 0.34
CCDC50-202ENST00000392456 OR2M5A3KFT3 312 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 IGKV3-11P04433 115 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 FGF5P12034 268 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 HMGA2P52926 109 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 RAP2BP61225 183 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 H3F3CQ6NXT2 135 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 MZT2AQ6P582 158 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 BAIAP2L2Q6UXY1 529 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 Q6ZTK2 550 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 SLC2A12Q8TD20 617 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF721Q8TF20 911 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 ROBO4Q8WZ75 1007 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 JAM3Q9BX67 310 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 RERGLQ9H628 205 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 AHCTF1Q8WYP5 2266 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 COL27A1Q8IZC6 1860 aaPredicted RBP17.18■□□□□ 0.34
CCDC50-202ENST00000392456 IGLV3-12A0A075B6K2 115 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 C4orf47A7E2U8 309 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 ARPC5O15511 151 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 HIST1H2ABP04908 130 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 RCC1P18754 421 aaPredicted RBP17.18■□□□□ 0.34
CCDC50-202ENST00000392456 TCF15Q12870 199 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 SLC36A2Q495M3 483 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 HIST3H2AQ7L7L0 130 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF619Q8N2I2 560 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 OR56B4Q8NH76 319 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 HIST1H2ACQ93077 130 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 S100PBPQ96BU1 408 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 NUDT9Q9BW91 350 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 TEX12Q9BXU0 123 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 NRSN2Q9GZP1 204 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 BEX1Q9HBH7 125 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 PARD6AQ9NPB6 346 aa17.18■□□□□ 0.34
CCDC50-202ENST00000392456 CNOT1A5YKK6 2376 aaKnown RBP17.17■□□□□ 0.34
CCDC50-202ENST00000392456 ACOD1A6NK06 481 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 PRR33A8MZF0 331 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 IDSB3KWA1 339 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 GATBO75879 557 aaKnown RBP17.17■□□□□ 0.34
CCDC50-202ENST00000392456 SPDEFO95238 335 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 HIST1H1BP16401 226 aaKnown RBP17.17■□□□□ 0.34
CCDC50-202ENST00000392456 ABOP16442 354 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 CPEP16870 476 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 ELK1P19419 428 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 GALNSP34059 522 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 CEACAM6P40199 344 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 ZNF239Q16600 458 aaKnown RBP17.17■□□□□ 0.34
CCDC50-202ENST00000392456 MAN2C1Q9NTJ4 1040 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 SEMA4GQ9NTN9 838 aa17.17■□□□□ 0.34
CCDC50-202ENST00000392456 MGAT4CQ9UBM8 478 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms