RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 GNPTGQ9UJJ9 305 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 VPREB3Q9UKI3 123 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 KLK9Q9UKQ9 250 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 MRPS16Q9Y3D3 137 aaKnown RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 NPTNQ9Y639 398 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 MUC22E2RYF6 1773 aaPredicted RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 OTOFQ9HC10 1997 aa-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.63□□□□□ -2.67
RNU6-540P-201ENST00000384622 UBN2Q6ZU65 1347 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 A0A087WUU8 490 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TRGV1A0A0A0MS02 117 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TRAV8-2A0A0B4J237 113 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 C5orf63A6NC05 138 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ANKUB1A6NFN9 424 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 LRRIQ4A6NIV6 560 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 YJEFN3A6XGL0 299 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 LY6LH3BQJ8 138 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 SIRPB1O00241 398 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 XKRYO14609 159 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR10H3O60404 316 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 PRAMEF11O60813 436 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF737O75373 536 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 IGLV3-1P01715 115 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 IGHV2-70P01814 119 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 OPN1LWP04000 364 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 PYGLP06737 847 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 LBPP18428 481 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 AQP1P29972 269 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 SOAT1P35610 550 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ATP5G3P48201 142 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 CDH6P55285 790 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 BACE1P56817 501 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 PRPS1P60891 318 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 SIRPAP78324 504 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 OLR1P78380 273 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 OGDHQ02218 1023 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF92Q03936 586 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ILKQ13418 452 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 PIGHQ14442 188 aaPredicted RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TIGD6Q17RP2 521 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 LRRC37A5PQ49AS3 106 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TP53I3Q53FA7 332 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 MS4A13Q5J8X5 152 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 RARS2Q5T160 578 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TANGO2Q6ICL3 276 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 CXCL17Q6UXB2 119 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TMIGD1Q6UXZ0 262 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 LINC00575Q6W349 94 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 Q6ZTI0 123 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 LINC00173Q6ZV60 143 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 GALNT10Q86SR1 603 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 LINC00596Q86U02 117 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 NT5DC3Q86UY8 548 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 CNTN4Q8IWV2 1026 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF679Q8IYX0 411 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ANKFN1Q8N957 763 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 C9orf163Q8N9P6 203 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 COLGALT1Q8NBJ5 622 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 LY6G5BQ8NDX9 201 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 C19orf18Q8NEA5 215 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR56A4Q8NGH8 313 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR4K13Q8NH42 304 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TCP11Q8WWU5 503 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 YIPF6Q96EC8 236 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 C14orf79Q96F83 325 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TMEM41AQ96HV5 264 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TSNAXQ99598 290 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 SELENOSQ9BQE4 189 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TIMM29Q9BSF4 260 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 INPP5KQ9BT40 448 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ADAT1Q9BUB4 502 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 MRPL9Q9BYD2 267 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 RPP21Q9H633 154 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 Q9H8V8 135 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ACTR8Q9H981 624 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 SCPEP1Q9HB40 452 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ISYNA1Q9NPH2 558 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TBC1D22BQ9NU19 505 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 UTP6Q9NYH9 597 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 TAS2R16Q9NYV7 291 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 CNOT2Q9NZN8 540 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 SEC14L4Q9UDX3 406 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 NOCTQ9UK39 431 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 FEM1BQ9UK73 627 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 KIF24Q5T7B8 1368 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 MAP3K5Q99683 1374 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 NPC1L1Q9UHC9 1359 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 KIF13BQ9NQT8 1826 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 NUP205Q92621 2012 aa-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZC3H13Q5T200 1668 aaKnown RBP-1.64□□□□□ -2.67
RNU6-540P-201ENST00000384622 NAV1Q8NEY1 1877 aa-1.65□□□□□ -2.67
RNU6-540P-201ENST00000384622 PRDM15P57071 1507 aaPredicted RBP-1.65□□□□□ -2.67
RNU6-540P-201ENST00000384622 TRAV22A0A0B4J277 110 aa-1.65□□□□□ -2.67
RNU6-540P-201ENST00000384622 TRBV6-5A0A0K0K1A5 114 aa-1.65□□□□□ -2.67
RNU6-540P-201ENST00000384622 CXorf51AA0A1B0GTR3 108 aa-1.65□□□□□ -2.67
RNU6-540P-201ENST00000384622 GSTTP1A0A1W2PQM5 241 aa-1.65□□□□□ -2.67
RNU6-540P-201ENST00000384622 CLDN25C9JDP6 229 aa-1.65□□□□□ -2.67
RNU6-540P-201ENST00000384622 K7EQS6 105 aa-1.65□□□□□ -2.67
RNU6-540P-201ENST00000384622 LYRM1O43325 122 aa-1.65□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms