RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PCBD2Q9H0N5 130 aa13.58□□□□□ -0.24
CTNS-202ENST00000381870 CHMP1AQ9HD42 196 aaPredicted RBP13.58□□□□□ -0.24
CTNS-202ENST00000381870 OR2S2Q9NQN1 319 aa13.58□□□□□ -0.24
CTNS-202ENST00000381870 PDE4DIPQ5VU43 2346 aa13.58□□□□□ -0.24
CTNS-202ENST00000381870 TICRRQ7Z2Z1 1910 aa13.58□□□□□ -0.24
CTNS-202ENST00000381870 TRBV5-7A0A0A0MS05 114 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 A0A0B4J2E0 115 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 A0A1B0GX12 115 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 C9orf170A2RU37 121 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 PHYHO14832 338 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 CDC40O60508 579 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTNS-202ENST00000381870 DAOP14920 347 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 HLA-GP17693 338 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 NME2P22392 152 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 PSMB6P28072 239 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 PBX2P40425 430 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 LPAR6P43657 344 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 HTR5AP47898 357 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 SKP1P63208 163 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 NAAAQ02083 359 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 PRDX1Q06830 199 aaKnown RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 ZNF124Q15973 351 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 CDNFQ49AH0 187 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 TRMT12Q53H54 448 aaKnown RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 DCST2Q5T1A1 773 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 LINC01590Q5TEZ4 76 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 FAM220AQ7Z4H9 259 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 AMZ2Q86W34 360 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 ZNF676Q8N7Q3 588 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 RHOVQ96L33 236 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 GAS2L1Q99501 681 aaPredicted RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 RNF126Q9BV68 326 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 TMPRSS5Q9H3S3 457 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 RXFP3Q9NSD7 469 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 APOBEC3BQ9UH17 382 aaKnown RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 CCL26Q9Y258 94 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 SLC27A6Q9Y2P4 619 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 TMED7Q9Y3B3 224 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 CXorf51AA0A1B0GTR3 108 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 C5orf51A6NDU8 294 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 MSGN1A6NI15 193 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 ZNF736B4DX44 427 aaPredicted RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 CRHP06850 196 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 BTF3P20290 206 aaKnown RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 PPICP45877 212 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 P2RY4P51582 365 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 SCAND1P57086 179 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 IL13RA1P78552 427 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 SSBP1Q04837 148 aaKnown RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 FAM76BQ5HYJ3 339 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 ZNF425Q6IV72 752 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 DRAM2Q6UX65 266 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 SLC25A42Q86VD7 318 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 DMRTC2Q8IXT2 367 aaPredicted RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 OR2L5Q8NG80 312 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 OR2A1Q8NGT9 310 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 ZNF417Q8TAU3 575 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 MITD1Q8WV92 249 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 ADAD1Q96M93 576 aaKnown RBP13.57□□□□□ -0.24
CTNS-202ENST00000381870 SULT4A1Q9BR01 284 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 ALG12Q9BV10 488 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 ADAP2Q9NPF8 381 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 ENTPD2Q9Y5L3 495 aa13.57□□□□□ -0.24
CTNS-202ENST00000381870 AP4M1O00189 453 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 TGM5O43548 720 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 AGR2O95994 175 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 CYB5AP00167 134 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 CD5P06127 495 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 RHOP08100 348 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 SNRNP70P08621 437 aaKnown RBP13.56□□□□□ -0.24
CTNS-202ENST00000381870 VAMP1P23763 118 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 LAP3P28838 519 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 ID4P47928 161 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 CSNK1EP49674 416 aaKnown RBP13.56□□□□□ -0.24
CTNS-202ENST00000381870 FLT3LGP49771 235 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 SP3Q02447 781 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 RAB11BQ15907 218 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 KLHL26Q53HC5 615 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 NRROSQ86YC3 692 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 LRRC25Q8N386 305 aaPredicted RBP13.56□□□□□ -0.24
CTNS-202ENST00000381870 ROBO4Q8WZ75 1007 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 GTF3AQ92664 365 aaKnown RBP13.56□□□□□ -0.24
CTNS-202ENST00000381870 MRGPRFQ96AM1 343 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 ZNF514Q96K75 400 aaPredicted RBP13.56□□□□□ -0.24
CTNS-202ENST00000381870 MRGPRX3Q96LB0 322 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 IP6K3Q96PC2 410 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 PHB2Q99623 299 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 TREM2Q9NZC2 230 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 GPR34Q9UPC5 381 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 INSL5Q9Y5Q6 135 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 EML5Q05BV3 1969 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 LOC100289279A0A1B0GTE1 492 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 A0A1W2PPC1 479 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 OR4C45A6NMZ5 311 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 FAM157AC9JC47 383 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 NPIPB9F8W1W9 429 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 H0YIZ8 118 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 CD2P06729 351 aa13.56□□□□□ -0.24
CTNS-202ENST00000381870 TACSTD2P09758 323 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms