RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 TSTD3H0UI37 97 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 SMAD7O15105 426 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 ARPC1BO15143 372 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 TOX3O15405 576 aaPredicted RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 DIRAS1O95057 198 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 CAPNS1P04632 268 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 NPPBP16860 134 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 MAGP20916 626 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 NAA10P41227 235 aaPredicted RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 STEAP3Q658P3 488 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 ACOT7LQ6ZUV0 252 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 FAM217AQ8IXS0 508 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 OR52H1Q8NGJ2 320 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 MRPS24Q96EL2 167 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 DCLRE1CQ96SD1 692 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 NUDT16L1Q9BRJ7 211 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 OR11A1Q9GZK7 315 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 ALX4Q9H161 411 aaPredicted RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 ZNF442Q9H7R0 627 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 BCO1Q9HAY6 547 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 ACER3Q9NUN7 267 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 LAMA4Q16363 1823 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 MT-ND4LP03901 98 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 TNFSF4P23510 183 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 CDKN1CP49918 316 aaPredicted RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 MMP15P51511 669 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 GTDC1Q4AE62 458 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 MAVSQ7Z434 540 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 BPIFB2Q8N4F0 458 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 GJC3Q8NFK1 279 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 OR52E1Q8NGJ3 308 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 OR6K3Q8NGY3 331 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 TM4SF18Q96CE8 201 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 USB1Q9BQ65 265 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 SUCNR1Q9BXA5 334 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 BEX2Q9BXY8 128 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 EXOSC3Q9NQT5 275 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 MRPS18AQ9NVS2 196 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 SPHK1Q9NYA1 384 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 GPR55Q9Y2T6 319 aaPredicted RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 N6AMT1Q9Y5N5 214 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 BAZ2AQ9UIF9 1905 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 COL4A6Q14031 1691 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 ANKRD30BLA7E2S9 258 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 CD300LBA8K4G0 201 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 NCR1O76036 304 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 CLDN14O95500 239 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 KIR2DL3P43628 341 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 HSD17B13Q7Z5P4 300 aaPredicted RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 ZNF546Q86UE3 836 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 GRAMD2AQ8IUY3 354 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 POGLUT1Q8NBL1 392 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 NETO2Q8NC67 525 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 OR4K13Q8NH42 304 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 FBXO27Q8NI29 283 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 WDR20Q8TBZ3 569 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 CT55Q8WUE5 264 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 FAM46AQ96IP4 442 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 INPP5KQ9BT40 448 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 TMEM59Q9BXS4 323 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 C14orf119Q9NWQ9 140 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 ERVK13-1Q9NX77 482 aa5.06□□□□□ -1.6
GEN1-202ENST00000381254 TMA7Q9Y2S6 64 aaKnown RBP5.06□□□□□ -1.6
GEN1-202ENST00000381254 ZNF850A8MQ14 1090 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 HCRTR1O43613 425 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 MTX2O75431 263 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 CH25HO95992 272 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 APEX1P27695 318 aaKnown RBP5.05□□□□□ -1.6
GEN1-202ENST00000381254 PTH2RP49190 550 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 WNT7BP56706 349 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 FXYD6P3P58550 94 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 PCK2Q16822 640 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 RNF212Q495C1 297 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 HSD11B1LQ7Z5J1 315 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 NRARPQ7Z6K4 114 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 CCDC71Q8IV32 467 aaPredicted RBP5.05□□□□□ -1.6
GEN1-202ENST00000381254 MMP21Q8N119 569 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 MARC2Q969Z3 335 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 KIRREL1Q96J84 757 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 TBX5Q99593 518 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 LRRC61Q9BV99 259 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 OR52A5Q9H2C5 316 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 TMEM269A0A1B0GVZ9 245 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 A0A1W2PPL8 197 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 HMSDA8MTL9 139 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 ATP6V1G2-DDX39BF2Z307 99 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 ST8SIA3O43173 380 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 AIFM1O95831 613 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 EDN3P14138 238 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 MGMTP16455 207 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 FOXA1P55317 472 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 UBE2NP61088 152 aaKnown RBP5.05□□□□□ -1.6
GEN1-202ENST00000381254 CSNK1G2P78368 415 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 SYT14P1Q58G82 188 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 ATAD3CQ5T2N8 411 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 C1QTNF12Q5T7M4 302 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 JMJD6Q6NYC1 403 aaPredicted RBP5.05□□□□□ -1.6
GEN1-202ENST00000381254 TRAT1Q6PIZ9 186 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 SUSD1Q6UWL2 747 aa5.05□□□□□ -1.6
GEN1-202ENST00000381254 ZNF761Q86XN6 746 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms