RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ISOC2Q96AB3 205 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 BCL2L14Q9BZR8 327 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 GAREM1Q9H706 876 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 A0A1B0GWA3 101 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 CD53P19397 219 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 NTSR1P30989 418 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 OR2B8PP59922 312 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 DCST2Q5T1A1 773 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 LRRC25Q8N386 305 aaPredicted RBP12.58□□□□□ -0.4
SDC1-202ENST00000381150 PHOSPHO1Q8TCT1 267 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 SFXN5Q8TD22 340 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 NR4A3Q92570 626 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 RPS10P5Q9NQ39 176 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 GSN-AS1Q9NRJ2 163 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 ZFP57Q9NU63 452 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 H7C417 338 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 SLC31A1O15431 190 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 OGG1O15527 345 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 SNAPINO95295 136 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 LY86O95711 162 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 CYB5AP00167 134 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 F13BP05160 661 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 ST6GAL1P15907 406 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 PPM1FP49593 454 aaPredicted RBP12.58□□□□□ -0.4
SDC1-202ENST00000381150 C9orf152Q5JTZ5 239 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 NKAPLQ5M9Q1 402 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 ENPP7Q6UWV6 458 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 VN1R4Q7Z5H5 301 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 ZAR1Q86SH2 424 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 GALNT16Q8N428 558 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 BPIFB2Q8N4F0 458 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 OR1J4Q8NGS1 313 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 FLVCR1-AS1Q8TAF5 88 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 RXFP3Q9NSD7 469 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 MTFP1Q9UDX5 166 aa12.58□□□□□ -0.4
SDC1-202ENST00000381150 PRSS38A1L453 326 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 GGT3PA6NGU5 568 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 ICOSLGO75144 302 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 ZNF888P0CJ79 500 aaPredicted RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 DAOP14920 347 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 TYRP1P17643 537 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 LAMA1P25391 3075 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 JMJD6Q6NYC1 403 aaPredicted RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 LRRC69Q6ZNQ3 347 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 JAGN1Q8N5M9 183 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 RGP1Q92546 391 aaPredicted RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 ARL11Q969Q4 196 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 PPP1R14AQ96A00 147 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 WDR77Q9BQA1 342 aaPredicted RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 PRR13Q9NZ81 148 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 HOXC4P09017 264 aaPredicted RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 TSFMP43897 325 aaKnown RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 CXADRP78310 365 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 POU4F2Q12837 409 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 DHRS2Q13268 280 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 ZNF528Q3MIS6 628 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 C11orf87Q6NUJ2 197 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 ELP5Q8TE02 316 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 FAM46BQ96A09 425 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 CMKLR1Q99788 373 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 S1PR5Q9H228 398 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 CGGBP1Q9UFW8 167 aaPredicted RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 STEAP1Q9UHE8 339 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 A0A0A6YYC8 382 aaPredicted RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 CPED1A4D0V7 1026 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 METTL21EPA6NDL7 271 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 C1orf196B1AJZ1 125 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 PRR32B1ATL7 298 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 I3L1I5 382 aaPredicted RBP12.57□□□□□ -0.4
SDC1-202ENST00000381150 M0R036 132 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 ZNF208O43345 1280 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 LSSP48449 732 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 IL13RA1P78552 427 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 Q499Y3 187 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 ZNF600Q6ZNG1 722 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 MOB3CQ70IA8 216 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 DPY19L4Q7Z388 723 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 JAZF1Q86VZ6 243 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 NRROSQ86YC3 692 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 GABRG1Q8N1C3 465 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 TEX19Q8NA77 164 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 OR6N1Q8NGY5 312 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 OR1E3Q8WZA6 343 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 POTEKPQ9BYX7 375 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 PLEKHA1Q9HB21 404 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 UPB1Q9UBR1 384 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 LAMP5Q9UJQ1 280 aa12.57□□□□□ -0.4
SDC1-202ENST00000381150 BCL2L11O43521 198 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 FBXO24O75426 580 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 NDUFB2O95178 105 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 SERPINA5P05154 406 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
SDC1-202ENST00000381150 CPT2P23786 658 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 FABP9Q0Z7S8 132 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 KLHL26Q53HC5 615 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 OR4K14Q8NGD5 310 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 OR10G6Q8NH81 332 aa12.56□□□□□ -0.4
SDC1-202ENST00000381150 MRPL48Q96GC5 212 aaKnown RBP12.56□□□□□ -0.4
SDC1-202ENST00000381150 ALG12Q9BV10 488 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms