RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SDHAP31040 664 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 GGTLC2Q14390 218 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 ISXQ2M1V0 245 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 FAM27D1Q5T7N8 215 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 TCEAL6Q6IPX3 200 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 C3P1Q6ZMU1 363 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 HIST3H2AQ7L7L0 130 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 POMGNT2Q8NAT1 580 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 HIST1H2ACQ93077 130 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 TCEAL3Q969E4 200 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 TSPAN32Q96QS1 320 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 SCP2D1Q9UJQ7 156 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 TMED7Q9Y3B3 224 aa12.88□□□□□ -0.35
CLCN4-201ENST00000380829 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 HPXP02790 462 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 OR2T7P0C7T2 308 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 CXCL2P19875 107 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 ARHGDIBP52566 201 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 POLR2GP62487 172 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLCN4-201ENST00000380829 GSG1Q2KHT4 349 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 MZT2AQ6P582 158 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 ZNF511Q8NB15 262 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 OR2T27Q8NH04 317 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 NUBPLQ8TB37 319 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 ELMOD3Q96FG2 381 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 DMRTA2Q96SC8 542 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 ALG12Q9BV10 488 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 OR11A1Q9GZK7 315 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 FKRPQ9H9S5 495 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 TAS2R10Q9NYW0 307 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 GRHPRQ9UBQ7 328 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 GPR160Q9UJ42 338 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 CLEC4AQ9UMR7 237 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 TRAV36DV7A0A075B6V5 113 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 DCTN6O00399 190 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 PDCD5O14737 125 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 PLPP2O43688 288 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 KDM4BO94953 1096 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 CD3GP09693 182 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 AHCYP23526 432 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLCN4-201ENST00000380829 POLR2HP52434 150 aaKnown RBP12.87□□□□□ -0.35
CLCN4-201ENST00000380829 MESTQ5EB52 335 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 FAM209BQ5JX69 171 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 LINC01590Q5TEZ4 76 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 SLC23A3Q6PIS1 610 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 SNX33Q8WV41 574 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 PTDSS2Q9BVG9 487 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 ZNF436Q9C0F3 470 aaPredicted RBP12.87□□□□□ -0.35
CLCN4-201ENST00000380829 SRA1Q9HD15 236 aaKnown RBP12.87□□□□□ -0.35
CLCN4-201ENST00000380829 NKIRAS2Q9NYR9 191 aa12.87□□□□□ -0.35
CLCN4-201ENST00000380829 A0A1B0GVI7 797 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 PSMD9O00233 223 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 NTN3O00634 580 aaPredicted RBP12.86□□□□□ -0.35
CLCN4-201ENST00000380829 GATBO75879 557 aaKnown RBP12.86□□□□□ -0.35
CLCN4-201ENST00000380829 WDPCPO95876 746 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 PLGP00747 810 aaPredicted RBP12.86□□□□□ -0.35
CLCN4-201ENST00000380829 FGF5P12034 268 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 BLVRAP53004 296 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 SLC26A5P58743 744 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 FLI1Q01543 452 aaPredicted RBP12.86□□□□□ -0.35
CLCN4-201ENST00000380829 MTFR2Q6P444 385 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 SAMD12Q8N8I0 201 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 OR13C5Q8NGS8 318 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 PELI1Q96FA3 418 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 PGLYRP3Q96LB9 341 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 TAS2R5Q9NYW4 299 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 COPZ2Q9P299 210 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 GNG8Q9UK08 70 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 NUBP2Q9Y5Y2 271 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 ALPK2Q86TB3 2170 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 SLC19A2O60779 497 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 GLCEO94923 617 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 SIX6O95475 246 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 ONECUT2O95948 504 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 MT-ND4P03905 459 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 TAS2R43P59537 309 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 SLC36A2Q495M3 483 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 SLC35D3Q5M8T2 416 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 MRPL14Q6P1L8 145 aaKnown RBP12.86□□□□□ -0.35
CLCN4-201ENST00000380829 GRINAQ7Z429 371 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 AGBL5Q8NDL9 886 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 BVESQ8NE79 360 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 GHSRQ92847 366 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 WDR89Q96FK6 387 aaPredicted RBP12.86□□□□□ -0.35
CLCN4-201ENST00000380829 SMAD5Q99717 465 aaKnown RBP12.86□□□□□ -0.35
CLCN4-201ENST00000380829 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
CLCN4-201ENST00000380829 ZNF593O00488 134 aaPredicted RBP12.85□□□□□ -0.35
CLCN4-201ENST00000380829 ZNF254O75437 659 aa12.85□□□□□ -0.35
CLCN4-201ENST00000380829 OR2J2O76002 312 aa12.85□□□□□ -0.35
CLCN4-201ENST00000380829 APEHP13798 732 aaKnown RBP12.85□□□□□ -0.35
CLCN4-201ENST00000380829 SHC1P29353 583 aa12.85□□□□□ -0.35
CLCN4-201ENST00000380829 DUSP3P51452 185 aaPredicted RBP12.85□□□□□ -0.35
CLCN4-201ENST00000380829 ACTA2P62736 377 aa12.85□□□□□ -0.35
CLCN4-201ENST00000380829 ACTG2P63267 376 aa12.85□□□□□ -0.35
CLCN4-201ENST00000380829 IL11RAQ14626 422 aa12.85□□□□□ -0.35
CLCN4-201ENST00000380829 DMKNQ6E0U4 476 aaPredicted RBP12.85□□□□□ -0.35
CLCN4-201ENST00000380829 TMEM205Q6UW68 189 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms