RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 H3F3CQ6NXT2 135 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 CDC20BQ86Y33 519 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 PFN4Q8NHR9 129 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 NECAP2Q9NVZ3 263 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 CCR6P51684 374 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 RIPPLY1Q0D2K3 151 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 SPINK9Q5DT21 86 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 GLIPR1L1Q6UWM5 242 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 TMEM207Q6UWW9 146 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 OR13H1Q8NG92 308 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 OR56B1Q8NGI3 324 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 CD200R1Q8TD46 325 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 TMEM255BQ8WV15 326 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
CHD3-203ENST00000380358 LYSMD1Q96S90 227 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 FAM212BQ9NTI7 297 aaPredicted RBP11.44□□□□□ -0.58
CHD3-203ENST00000380358 NTNG1Q9Y2I2 539 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 SPP1P10451 314 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 SHC1P29353 583 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 H3F3AP84243 136 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 ZNF90Q03938 601 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 YOD1Q5VVQ6 348 aaPredicted RBP11.44□□□□□ -0.58
CHD3-203ENST00000380358 ISCA2Q86U28 154 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 ANGPTL5Q86XS5 388 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 BTNL2Q9UIR0 455 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 SLC16A6O15403 523 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 APELAP0DMC3 54 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 BMP5P22003 454 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 SLC5A12Q1EHB4 618 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 LSMEM2Q8N112 164 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 BLNKQ8WV28 456 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 TRUB1Q8WWH5 349 aaKnown RBP11.44□□□□□ -0.58
CHD3-203ENST00000380358 DHRS4Q9BTZ2 278 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 CLEC1BQ9P126 229 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 CTSFQ9UBX1 484 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 EXO1Q9UQ84 846 aaKnown RBP11.44□□□□□ -0.58
CHD3-203ENST00000380358 COX7A2P2O60397 106 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 GPR75O95800 540 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 RING1Q06587 406 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 TIFABQ6ZNK6 161 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 NOXA1Q86UR1 476 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 WDR5BQ86VZ2 330 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 DTWD1Q8N5C7 304 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 OR10R2Q8NGX6 335 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 M1APQ8TC57 530 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 SLCO4A1Q96BD0 722 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 CPPED1Q9BRF8 314 aaPredicted RBP11.44□□□□□ -0.58
CHD3-203ENST00000380358 OR52A5Q9H2C5 316 aa11.44□□□□□ -0.58
CHD3-203ENST00000380358 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 COX7A1P24310 79 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 ZNF140P52738 457 aaPredicted RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 WNT7BP56706 349 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 SNTB1Q13884 538 aaKnown RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 PRSS48Q7RTY5 328 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 MINDY1Q8N5J2 469 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 PECRQ9BY49 303 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 SLCO5A1Q9H2Y9 848 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 C21orf33P30042 268 aaPredicted RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 PDCD1Q15116 288 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 PGGHGQ32M88 737 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 PLAG1Q6DJT9 500 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 IGSF5Q9NSI5 407 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 ZNF391Q9UJN7 358 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 OR6C68A6NDL8 312 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 ZNF724A8MTY0 619 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 TCTAP57738 103 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 ERHP84090 104 aaKnown RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 NXNL2Q5VZ03 156 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 OR10K2Q6IF99 312 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 TMEM231Q9H6L2 316 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 BLACEA4D250 179 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 DEFB108AA8MXU0 73 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 PPP6CO00743 305 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 GASTP01350 101 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 MMP7P09237 267 aaPredicted RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 SRP9P49458 86 aaKnown RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 VAMP3Q15836 100 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 IAH1Q2TAA2 248 aaPredicted RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 PRSS36Q5K4E3 855 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 RANBP10Q6VN20 620 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 PIANPQ8IYJ0 282 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 ENTHD1Q8IYW4 607 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 TCTE3Q8IZS6 198 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 EXD3Q8N9H8 876 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 PATE1Q8WXA2 126 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 LCORQ96JN0 433 aaPredicted RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 LURAP1Q96LR2 239 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 CTDSP1Q9GZU7 261 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 C1GALT1Q9NS00 363 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 ACOXLQ9NUZ1 547 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 GDE1Q9NZC3 331 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 RAB19A4D1S5 217 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 NOVA1P51513 510 aaKnown RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 HBA1P69905 142 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 C19orf57Q0VDD7 668 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 LRRC28Q86X40 367 aaPredicted RBP11.43□□□□□ -0.58
CHD3-203ENST00000380358 ETFBKMTQ8IXQ9 262 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 TMEM106AQ96A25 262 aa11.43□□□□□ -0.58
CHD3-203ENST00000380358 CACNG3O60359 315 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms