RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 VDAC3Q9Y277 283 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 MTCH2Q9Y6C9 303 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 A0A0D9SG52 128 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 ZFPL1O95159 310 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 HTR3BO95264 441 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 MPIG6BO95866 241 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 HLA-DQB1P01920 261 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 ERCC1P07992 297 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-202ENST00000379826 ADRB1P08588 477 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 TMIGD3P0DMS9 266 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-202ENST00000379826 ZXDAP98168 799 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 OR10K2Q6IF99 312 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 PPP1R14AQ96A00 147 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 GHITMQ9H3K2 345 aa10.37□□□□□ -0.75
SMAD9-202ENST00000379826 OTOL1A6NHN0 477 aaPredicted RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 CRTAPO75718 401 aaPredicted RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 PEBP1P30086 187 aaKnown RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 MPLP40238 635 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ADPRHP54922 357 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 CD200R1LQ6Q8B3 271 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 PARM1Q6UWI2 310 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 TMPRSS11FQ6ZWK6 438 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 MARCH3Q86UD3 253 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 GABRG1Q8N1C3 465 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 MUC20Q8N307 709 aaPredicted RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 OR2AK2Q8NG84 335 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ZPLD1Q8TCW7 415 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ARL11Q969Q4 196 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 LMF2Q9BU23 707 aaKnown RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 SLCO1C1Q9NYB5 712 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 KCNG2Q9UJ96 466 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 MOKQ9UQ07 419 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 TMEM269A0A1B0GVZ9 245 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 UTS2O95399 124 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ABOP16442 354 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 OR1D4P47884 311 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 TMEM88Q6PEY1 159 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 PNLDC1Q8NA58 520 aaKnown RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 STK35Q8TDR2 534 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 EIF5A2Q9GZV4 153 aaKnown RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 FLRT3Q9NZU0 649 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF264O43296 627 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 CSNK1EP49674 416 aaKnown RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ARG2P78540 354 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 CAMK2DQ13557 499 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 DEFB133Q30KQ1 61 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 VN1R4Q7Z5H5 301 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 OR1J4Q8NGS1 313 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 RSPRY1Q96DX4 576 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 FAM71F1Q96KD3 344 aaPredicted RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ASB16Q96NS5 453 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 LYRM4Q9HD34 91 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 SHOXO15266 292 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 KLK10O43240 276 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 IGF2P01344 180 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 CD14P08571 375 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 RRASP10301 218 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 POU3F2P20265 443 aaPredicted RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 CD38P28907 300 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 NSDHLQ15738 373 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ELP5Q8TE02 316 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 LRRC3BQ96PB8 259 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 ARPC5LQ9BPX5 153 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 UBQLN4Q9NRR5 601 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 TANC1Q9C0D5 1861 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 LOC105371267A0A1B0GV96 52 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 MPC2O95563 127 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 OR4E1P0C645 316 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 NR2C2APQ86WQ0 139 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 SPEM1Q8N4L4 309 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 OR1J2Q8NGS2 313 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 OR14A16Q8NHC5 309 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 PRRT1Q99946 306 aa10.36□□□□□ -0.75
SMAD9-202ENST00000379826 LSM5Q9Y4Y9 91 aaKnown RBP10.36□□□□□ -0.75
SMAD9-202ENST00000379826 CCDC88CQ9P219 2028 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 A0A0A6YYH2 397 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 A6NJ64 397 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF726A6NNF4 738 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 SPINT1O43278 529 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF208O43345 1280 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 TRAPPC6AO75865 159 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 HEXBP07686 556 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 CXCL2P19875 107 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 NEK7Q8TDX7 302 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF587Q96SQ5 575 aaPredicted RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 DNAJB12Q9NXW2 375 aaKnown RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 PMS2P2O95744 297 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 THY1P04216 161 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 TPT1P13693 172 aaKnown RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 RPL18Q07020 188 aaKnown RBP10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF616Q08AN1 781 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 PMPCAQ10713 525 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ZNF585AQ6P3V2 769 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 OR4S1Q8NGB4 309 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 OR5H2Q8NGV7 314 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 HSD17B8Q92506 261 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 NTMQ9P121 344 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 ST6GALNAC2Q9UJ37 374 aa10.35□□□□□ -0.75
SMAD9-202ENST00000379826 PTPRDP23468 1912 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms