RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 OR11L1Q8NGX0 322 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 OR10Z1Q8NGY1 313 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 SECTM1Q8WVN6 248 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 GABARAPL1Q9H0R8 117 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 NTNG1Q9Y2I2 539 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 CHST2Q9Y4C5 530 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 PCYT1BQ9Y5K3 369 aaPredicted RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC22A7Q9Y694 548 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 DDX60LQ5H9U9 1706 aaKnown RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC2A10O95528 541 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 TRIP6Q15654 476 aaKnown RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 PDZD11Q5EBL8 140 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 ZMAT1Q5H9K5 638 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 FAM71E1Q6IPT2 247 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 BRICD5Q6PL45 260 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 MKXQ8IYA7 352 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM217Q8N7C4 229 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 OR51S1Q8NGJ8 323 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 FAM3DQ96BQ1 224 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 TIMD4Q96H15 378 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 NOSIPQ9Y314 301 aaKnown RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 CORINQ9Y5Q5 1042 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 GPX5O75715 221 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 PTBP1P26599 531 aaKnown RBP eCLIP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 BIDP55957 195 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 IKZF1Q13422 519 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF684Q5T5D7 378 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 RNLSQ5VYX0 342 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 PLPP5Q8NEB5 264 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 OR13H1Q8NG92 308 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 OR52N1Q8NH53 320 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 NXPE3Q969Y0 559 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 YIPF6Q96EC8 236 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 PARP12Q9H0J9 701 aaKnown RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 OR6C76A6NM76 312 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ADRB1P08588 477 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 SSX9Q7RTT3 188 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC43A2Q8N370 569 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC39A7Q92504 469 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM43Q9BTV4 400 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ANKRD19PQ9H560 264 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TMED7-TICAM2A0A0A6YYA0 188 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 AKR7A2O43488 359 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TK1P04183 234 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 NPY4RP50391 375 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 CCR9P51686 369 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ACSM1Q08AH1 577 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 MED25Q71SY5 747 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF595Q8IYB9 648 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ADGRF3Q8IZF5 1079 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 DMBX1Q8NFW5 382 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 OR51D1Q8NGF3 324 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 PATZ1Q9HBE1 687 aaKnown RBP11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TMED7Q9Y3B3 224 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM202A6NGA9 273 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF728P0DKX0 622 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 MGST1P10620 155 aaKnown RBP11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 GLYATL3Q5SZD4 288 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 OR2I1PQ8NGU4 316 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 PRSS16Q9NQE7 514 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 FBXO7Q9Y3I1 522 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 URGCP-MRPS24S4R325 110 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TRAV36DV7A0A075B6V5 113 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC5A10A0PJK1 596 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM235A6NFC5 223 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 PHF1O43189 567 aaPredicted RBP11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 HRO43593 1189 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ETV6P41212 452 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 AKR1C1Q04828 323 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 SAXO2Q658L1 398 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 SYT9Q86SS6 491 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM99Q8N816 258 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF511Q8NB15 262 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 DTWD2Q8NBA8 298 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 DYNC2LI1Q8TCX1 351 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 P2RY12Q9H244 342 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 NIT2Q9NQR4 276 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 NDUFB11Q9NX14 153 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 PKD1L3Q7Z443 1732 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 LRIT2A6NDA9 550 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 C17orf112F2Z3M2 114 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 YIF1AO95070 293 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 CNIH1O95406 144 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 SLC35A2P78381 396 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 DUSP2Q05923 314 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 BAK1Q16611 211 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 FAM122BQ7Z309 247 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 CPEB2Q7Z5Q1 589 aaKnown RBP11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 SPNS2Q8IVW8 549 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TRMT61AQ96FX7 289 aaKnown RBP11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 ACOXLQ9NUZ1 547 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 CGGBP1Q9UFW8 167 aaPredicted RBP11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 FBXO4Q9UKT5 387 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 TRAPPC2LQ9UL33 140 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 HRH3Q9Y5N1 445 aa11.01□□□□□ -0.65
PCDHA9-201ENST00000378122 AQP7O14520 342 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 TAS2R30P59541 319 aa11□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM176BQ3YBM2 270 aaPredicted RBP11□□□□□ -0.65
PCDHA9-201ENST00000378122 SYT14P1Q58G82 188 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms