RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ESAMQ96AP7 390 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 MIOXQ9UGB7 285 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 A0A1W2PPH5 198 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 MEN1O00255 615 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PMP2P02689 132 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SERPINA7P05543 415 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 RAB5AP20339 215 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 BHLHA9Q7RTU4 235 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 OR51S1Q8NGJ8 323 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TAAR8Q969N4 342 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 RNF2Q99496 336 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 EBPLQ9BY08 206 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TAF9BQ9HBM6 251 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF225Q9UK10 706 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ADAM18Q9Y3Q7 739 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 KDM3BQ7LBC6 1761 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 A0A0A6YYD5 115 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 NAA10P41227 235 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CPNE8Q86YQ8 564 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 LPAR3Q9UBY5 353 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF850A8MQ14 1090 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 HSD17B6O14756 317 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 GLSO94925 669 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PITX1P78337 314 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SLC35E3Q7Z769 313 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM40Q8WWA1 233 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM265A0A087WTH1 108 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 A0A1B0GWA3 101 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 XKRY2A2RUG3 117 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 IQCF5A8MTL0 148 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PIP5K1CO60331 668 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CNOT4O95628 575 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PLPP5Q8NEB5 264 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 DPCDQ9BVM2 203 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 RRAGCQ9HB90 399 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 OR6C68A6NDL8 312 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ELL3Q9HB65 397 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 METTL15P1P0C7V9 234 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 DCDP81605 110 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ZP2Q05996 745 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TRMT12Q53H54 448 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 C11orf87Q6NUJ2 197 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 OR2AK2Q8NG84 335 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 DEFB118Q96PH6 123 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TAAR2Q9P1P5 351 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PLPP1O14494 284 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 POU3F2P20265 443 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 hCG_1807616A0A1W2PRN6 198 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TMIGD3P0DMS9 266 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 C1orf100Q5SVJ3 147 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 LIPNQ5VXI9 398 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CPNE4Q96A23 557 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 C1SP09871 688 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ALDH3B1P43353 468 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 KCNMB1Q16558 191 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SCGB2B2Q4G0G5 96 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CYB561A3Q8NBI2 242 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 MCHR2Q969V1 340 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 GGACTQ9BVM4 153 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 FLVCR2Q9UPI3 526 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CD8AP01732 235 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TGIF2Q9GZN2 237 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 UBE2ZQ9H832 354 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 GZMHP20718 246 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CATR1Q13166 79 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 RBM23Q86U06 439 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SPACA9Q96E40 222 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CENPMQ9NSP4 180 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 YARS2Q9Y2Z4 477 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ETV5P41161 510 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 DUSP5Q16690 384 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PAPD4Q6PIY7 484 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 OR52A4PA6NMU1 304 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 XRCC2O43543 280 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 POLR2GP62487 172 aaKnown RBP eCLIP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 NHLRC3Q5JS37 347 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CCSAPQ6IQ19 270 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 UHRF2Q96PU4 802 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 HRH4Q9H3N8 390 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ACSM4P0C7M7 580 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CTRB1P17538 263 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SNRPD2P62316 118 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CTRB2Q6GPI1 263 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 COMMD7Q86VX2 200 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF705EA8MWA4 302 aaPredicted RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 CRYABP02511 175 aaKnown RBP4.51□□□□□ -1.69
PCDH9-201ENST00000377861 RRADP55042 308 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 KCNAB1Q14722 419 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 ZBTB46Q86UZ6 589 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 NUBPLQ8TB37 319 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 GPR137Q96N19 417 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 VDAC1P21796 283 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SFTPDP35247 375 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 HHEXQ03014 270 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 PLXDC2Q6UX71 529 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 SUMF2Q8NBJ7 301 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 FGGYQ96C11 551 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM59Q9BXS4 323 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 COX5AP20674 150 aa4.51□□□□□ -1.69
PCDH9-201ENST00000377861 FASLGP48023 281 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms