RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 HDDC2Q7Z4H3 204 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 OMA1Q96E52 524 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 UCK1Q9HA47 277 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 CUTCQ9NTM9 273 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 TUBAL3A6NHL2 446 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 CDC40O60508 579 aaKnown RBP eCLIP22.82■■□□□ 1.24
C9orf40-201ENST00000376854 SNAPC5O75971 98 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 WISP1O95388 367 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 ACKR1Q16570 336 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 NHLRC3Q5JS37 347 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 ZNF679Q8IYX0 411 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 OR5M1Q8NGP8 315 aa22.82■■□□□ 1.24
C9orf40-201ENST00000376854 LOC100289279A0A1B0GTE1 492 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 SLC16A7O60669 478 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 OR6A2O95222 327 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 SPARCP09486 303 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 CSF2RBP32927 897 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 RPL27P61353 136 aaKnown RBP22.81■■□□□ 1.24
C9orf40-201ENST00000376854 SLC18B1Q6NT16 456 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 SLC38A6Q8IZM9 456 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 OR6N1Q8NGY5 312 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 PPP1R14AQ96A00 147 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 NUDT9Q9BW91 350 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 KIF25Q9UIL4 384 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 SLC17A2O00624 439 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 RGS11O94810 467 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 SIX6O95475 246 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 PNPP00491 289 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 FCER2P06734 321 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 AKAIN1P0CW23 69 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 PRSS3P35030 304 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 NR0B1P51843 470 aaKnown RBP22.81■■□□□ 1.24
C9orf40-201ENST00000376854 ZP2Q05996 745 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 SGCBQ16585 318 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 BPHLQ86WA6 291 aaPredicted RBP22.81■■□□□ 1.24
C9orf40-201ENST00000376854 OR51S1Q8NGJ8 323 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 RNF128Q8TEB7 428 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 PNPLA2Q96AD5 504 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 PTDSS2Q9BVG9 487 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 RDH8Q9NYR8 311 aa22.81■■□□□ 1.24
C9orf40-201ENST00000376854 IGKV3D-11A0A0A0MRZ8 115 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 SUSD5O60279 629 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 GP1BBP13224 206 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 H2BFSP57053 126 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 C2orf68Q2NKX9 166 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 TEX30Q5JUR7 227 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 WDR45BQ5MNZ6 344 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 GKN2Q86XP6 184 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 ZNF519Q8TB69 540 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 NKX3-1Q99801 234 aaPredicted RBP22.8■■□□□ 1.24
C9orf40-201ENST00000376854 TBL1XR1Q9BZK7 514 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 MRPL22Q9NWU5 206 aaKnown RBP22.8■■□□□ 1.24
C9orf40-201ENST00000376854 OPN4Q9UHM6 478 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 SPEF1Q9Y4P9 236 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 MT-ATP6P00846 226 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 PGCP20142 388 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 SEC61A1P61619 476 aaKnown RBP22.8■■□□□ 1.24
C9orf40-201ENST00000376854 OC90Q02509 493 aaPredicted RBP22.8■■□□□ 1.24
C9orf40-201ENST00000376854 EBPQ15125 230 aaKnown RBP22.8■■□□□ 1.24
C9orf40-201ENST00000376854 HLA-DQA1Q5Y7H0 255 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 ASPHD2Q6ICH7 369 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 PLPP7Q8NBV4 271 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 ATG5Q9H1Y0 275 aa22.8■■□□□ 1.24
C9orf40-201ENST00000376854 OR6C65A6NJZ3 312 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 EIF4E2O60573 245 aaKnown RBP22.79■■□□□ 1.24
C9orf40-201ENST00000376854 UBE2MP61081 183 aaKnown RBP22.79■■□□□ 1.24
C9orf40-201ENST00000376854 INSM1Q01101 510 aaPredicted RBP22.79■■□□□ 1.24
C9orf40-201ENST00000376854 KRT77Q7Z794 578 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 ADGRG3Q86Y34 549 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 C9orf40Q8IXQ3 194 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 RBPMSQ93062 196 aaKnown RBP22.79■■□□□ 1.24
C9orf40-201ENST00000376854 DHDHQ9UQ10 334 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 TMEM272A0A1B0GTI8 110 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 ALG1L2C9J202 215 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 ARPC5O15511 151 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 CD3DP04234 171 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 DCAF7P61962 342 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 ADAM8P78325 824 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 PLCXD2Q0VAA5 305 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 ELAVL1Q15717 326 aaKnown RBP22.79■■□□□ 1.24
C9orf40-201ENST00000376854 ETFDHQ16134 617 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 TMEM65Q6PI78 240 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 NDUFAF7Q7L592 441 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 MUC20Q8N307 709 aaPredicted RBP22.79■■□□□ 1.24
C9orf40-201ENST00000376854 OR8S1Q8NH09 359 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 SLC17A5Q9NRA2 495 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 DHCR7Q9UBM7 475 aaKnown RBP22.79■■□□□ 1.24
C9orf40-201ENST00000376854 EPHA6Q9UF33 1036 aa22.79■■□□□ 1.24
C9orf40-201ENST00000376854 ALPK2Q86TB3 2170 aa22.78■■□□□ 1.24
C9orf40-201ENST00000376854 GOSR2O14653 212 aa22.78■■□□□ 1.24
C9orf40-201ENST00000376854 ZNF35P13682 527 aa22.78■■□□□ 1.24
C9orf40-201ENST00000376854 MFGE8Q08431 387 aaPredicted RBP22.78■■□□□ 1.24
C9orf40-201ENST00000376854 MFSD13AQ14CX5 517 aa22.78■■□□□ 1.24
C9orf40-201ENST00000376854 OR7E24Q6IFN5 339 aa22.78■■□□□ 1.24
C9orf40-201ENST00000376854 OR2AK2Q8NG84 335 aa22.78■■□□□ 1.24
C9orf40-201ENST00000376854 DVL3Q92997 716 aaPredicted RBP22.78■■□□□ 1.24
C9orf40-201ENST00000376854 RELTQ969Z4 430 aa22.78■■□□□ 1.24
C9orf40-201ENST00000376854 THADAQ6YHU6 1953 aa22.78■■□□□ 1.24
C9orf40-201ENST00000376854 IGLV1-36A0A0B4J1U3 117 aa22.77■■□□□ 1.24
C9orf40-201ENST00000376854 LOC105371267A0A1B0GV96 52 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms