RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 PUS1Q9Y606 427 aaKnown RBP eCLIP8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 COL16A1Q07092 1604 aaPredicted RBP8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 SIPA1L1O43166 1804 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 AGRPO00253 132 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 PGA3P0DJD8 388 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 TMEM229BQ8NBD8 167 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 MOCOSQ96EN8 888 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 SLC25A37Q9NYZ2 338 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 ZSWIM8A7E2V4 1837 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 C4orf47A7E2U8 309 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 FBLP22087 321 aaKnown RBP8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 CCR6P51684 374 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 COTL1Q14019 142 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 NSDHLQ15738 373 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 CYB561A3Q8NBI2 242 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 SLC17A9Q9BYT1 436 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 ZNF160Q9HCG1 818 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 FBXL2Q9UKC9 423 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 KCNS2Q9ULS6 477 aa8.12□□□□□ -1.11
SHROOM4-202ENST00000376020 PRAMEF19Q5SWL8 479 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 GPR137CQ8N3F9 429 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PP6455Q8WZ26 134 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 KLF16Q9BXK1 252 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 HRASLSQ9HDD0 168 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PURGQ9UJV8 347 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PCNX2A6NKB5 2137 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 CRYBB2P43320 205 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 CSNK1A1P48729 337 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 ZNF85Q03923 595 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 ZNF92Q03936 586 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 SLC14A1Q13336 389 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 AARDQ4LEZ3 155 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 KANSL1Q7Z3B3 1105 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PTX4Q96A99 478 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 AIFM1O95831 613 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 ZNF8P17098 575 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 DGKEP52429 567 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 SLC35A1P78382 337 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 EBPQ15125 230 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 GDF6Q6KF10 455 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 C11orf87Q6NUJ2 197 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 C8orf82Q6P1X6 216 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 OR2W3Q7Z3T1 314 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PPP1R3BQ86XI6 285 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PXYLP1Q8TE99 480 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 SHARPINQ9H0F6 387 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 SIP14410 1827 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 POM121CA8CG34 1229 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 DUSP3P51452 185 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 HNRNPKP61978 463 aaKnown RBP eCLIP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 LEXMQ3ZCV2 418 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 OR51S1Q8NGJ8 323 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 KLHDC7BQ96G42 594 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 NUDT9Q9BW91 350 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PLK3Q9H4B4 646 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 NARFLQ9H6Q4 476 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 MTFP1Q9UDX5 166 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 RPH3AQ9Y2J0 694 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 GTF3C1Q12789 2109 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 FAM183AA6NL82 134 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 C11orf98E9PRG8 122 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PEX12O00623 359 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PFN3P60673 137 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 KIAA0895LQ68EN5 471 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 DOK3Q7L591 496 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 MKXQ8IYA7 352 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 GPR173Q9NS66 373 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 SLC5A6Q9Y289 635 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 ABCA4P78363 2273 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 A0A0G2JN53 185 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 SLC17A2O00624 439 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 B4GALT2O60909 372 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 OR4E1P0C645 316 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 DHPSP49366 369 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 RAB38P57729 211 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 DVL3Q92997 716 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 GPR174Q9BXC1 333 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 SFXN1Q9H9B4 322 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 NXT1Q9UKK6 140 aaKnown RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 AP4M1O00189 453 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 FBXO24O75426 580 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 LIMS3P0CW19 117 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 LIMS4P0CW20 117 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 HOXB1P14653 301 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 WASP42768 502 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 DLX2Q07687 328 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 CLEC1AQ8NC01 280 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 C19orf53Q9UNZ5 99 aaPredicted RBP8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 LY75O60449 1722 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 DVL1O14640 695 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 AGPAT2O15120 278 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 IGLV3-27P01718 113 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 HOXB2P14652 356 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 FUT4P22083 530 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 BMPR1AP36894 532 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 MOGAT2Q3SYC2 334 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 PLPP4Q5VZY2 271 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 MOB1BQ7L9L4 216 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 ZNF366Q8N895 744 aa8.11□□□□□ -1.11
SHROOM4-202ENST00000376020 GJC3Q8NFK1 279 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms