RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 TTLL10Q6ZVT0 673 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 MAMDC2Q7Z304 686 aaPredicted RBP13.13□□□□□ -0.31
MSH5-201ENST00000375703 GLRX5Q86SX6 157 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 OR8S1Q8NH09 359 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 ASB17Q8WXJ9 295 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 TSLPQ969D9 159 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 ATG5Q9H1Y0 275 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 OPN4Q9UHM6 478 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 LOC100289279A0A1B0GTE1 492 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 A0A1W2PPC4 97 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 PRSS37A4D1T9 235 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 SLC17A2O00624 439 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 ARPC5O15511 151 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 SLC16A7O60669 478 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 PNPP00491 289 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 CD3DP04234 171 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 CSF2RBP32927 897 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 UBE2MP61081 183 aaKnown RBP13.13□□□□□ -0.31
MSH5-201ENST00000375703 ACKR1Q16570 336 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 ARHGAP40Q5TG30 622 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 SLC18B1Q6NT16 456 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 MUC20Q8N307 709 aaPredicted RBP13.13□□□□□ -0.31
MSH5-201ENST00000375703 OR2AK2Q8NG84 335 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 RNF128Q8TEB7 428 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 DVL3Q92997 716 aaPredicted RBP13.13□□□□□ -0.31
MSH5-201ENST00000375703 TMEM138Q9NPI0 162 aa13.13□□□□□ -0.31
MSH5-201ENST00000375703 OR6C65A6NJZ3 312 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 HMSDA8MTL9 139 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 SPARCP09486 303 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 CFPP27918 469 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 RPL27P61353 136 aaKnown RBP13.12□□□□□ -0.31
MSH5-201ENST00000375703 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 TMUB2Q71RG4 321 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 KRT77Q7Z794 578 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 NKX3-1Q99801 234 aaPredicted RBP13.12□□□□□ -0.31
MSH5-201ENST00000375703 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.12□□□□□ -0.31
MSH5-201ENST00000375703 COQ3Q9NZJ6 369 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 hCG_1807616A0A1W2PRN6 198 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 GOSR2O14653 212 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 IGKV3-11P04433 115 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 ACSM4P0C7M7 580 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 GP1BBP13224 206 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 ZNF35P13682 527 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 POU3F2P20265 443 aaPredicted RBP13.12□□□□□ -0.31
MSH5-201ENST00000375703 NR0B1P51843 470 aaKnown RBP13.12□□□□□ -0.31
MSH5-201ENST00000375703 ELOCQ15369 112 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 TEX30Q5JUR7 227 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 HLA-DQA1Q5Y7H0 255 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 PLPP7Q8NBV4 271 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 LMX1AQ8TE12 382 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 TNFAIP8L1Q8WVP5 186 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.12□□□□□ -0.31
MSH5-201ENST00000375703 NUDT9Q9BW91 350 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 EXO5Q9H790 373 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 EPHA6Q9UF33 1036 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 DHDHQ9UQ10 334 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 MMACHCQ9Y4U1 282 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 TMEM272A0A1B0GTI8 110 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 FITM1A5D6W6 292 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 F5H5P2 479 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 WISP1O95388 367 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 DDAH2O95865 285 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 PGCP20142 388 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 ZP2Q05996 745 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 ETFDHQ16134 617 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 SGCBQ16585 318 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 STEAP1BQ6NZ63 245 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 NDUFAF7Q7L592 441 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 GPAT4Q86UL3 456 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 TBL1XR1Q9BZK7 514 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 CHST6Q9GZX3 395 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 ARL6Q9H0F7 186 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 FXYD6Q9H0Q3 95 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 SLC17A5Q9NRA2 495 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 CUTCQ9NTM9 273 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
MSH5-201ENST00000375703 MSRAQ9UJ68 235 aa13.12□□□□□ -0.31
MSH5-201ENST00000375703 RP2O75695 350 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 WNT11O96014 354 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 MT-ATP6P00846 226 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 IGLV3-19P01714 112 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 ADAM8P78325 824 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
MSH5-201ENST00000375703 C4orf46Q504U0 113 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 KCTD18Q6PI47 426 aaPredicted RBP13.11□□□□□ -0.31
MSH5-201ENST00000375703 GALNT11Q8NCW6 608 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 OR1J4Q8NGS1 313 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 COQ8AQ8NI60 647 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 RELTQ969Z4 430 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 TLCD2A6NGC4 264 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 EIF4E2O60573 245 aaKnown RBP13.11□□□□□ -0.31
MSH5-201ENST00000375703 GMFBP60983 142 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 DCAF7P61962 342 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 GLT8D1Q68CQ7 371 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 TMEM225Q6GV28 225 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 ASPHD2Q6ICH7 369 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 OR7E24Q6IFN5 339 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms